RNA–Protein interactions for RNA: ENST00000604689.1

TUBE1-207, Transcript of tubulin epsilon 1, humanhuman

Gene TUBE1, Length 3,610 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-207ENST00000604689 RTEL1Q9NZ71 1219 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 STIM2Q9P246 746 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 PRKAG3Q9UGI9 489 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 SERTAD1Q9UHV2 236 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 ATPIF1Q9UII2 106 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 CAMTA1Q9Y6Y1 1673 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 L1CAMP32004 1257 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 ADCY8P40145 1251 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 CBX3Q13185 183 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 PCSK7Q16549 785 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 PTPN21Q16825 1174 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 VPS53Q5VIR6 699 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 TMEM53Q6P2H8 277 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 RNF19BQ6ZMZ0 732 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 TADA2BQ86TJ2 420 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 NLRP14Q86W24 1093 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 MAGEB6Q8N7X4 407 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 CUL5Q93034 780 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 SMARCE1Q969G3 411 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 PLD4Q96BZ4 506 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 MTMR9Q96QG7 549 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 PLEKHA4Q9H4M7 779 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 STARD7Q9NQZ5 370 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 ZNF277Q9NRM2 450 aaPredicted RBP7.8□□□□□ -1.16
TUBE1-207ENST00000604689 USP16Q9Y5T5 823 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 ARHGAP23Q9P227 1491 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 CD109Q6YHK3 1445 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 PMM2O15305 246 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 TROVE2P10155 538 aaKnown RBP eCLIP7.8□□□□□ -1.16
TUBE1-207ENST00000604689 RPL17P18621 184 aaKnown RBP7.8□□□□□ -1.16
TUBE1-207ENST00000604689 DNAJB1P25685 340 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 ATP5DP30049 168 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 HNRNPH1P31943 449 aaKnown RBP7.8□□□□□ -1.16
TUBE1-207ENST00000604689 PTGS2P35354 604 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 ITGA7Q13683 1181 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 ANO6Q4KMQ2 910 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 TM4SF20Q53R12 229 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 C2orf27AQ580R0 203 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 NUGGCQ68CJ6 796 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 FAM180BQ6P0A1 224 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 RNF180Q86T96 592 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 ZNF397Q8NF99 534 aaPredicted RBP7.8□□□□□ -1.16
TUBE1-207ENST00000604689 ZNF296Q8WUU4 475 aaPredicted RBP7.8□□□□□ -1.16
TUBE1-207ENST00000604689 DDX18Q9NVP1 670 aaKnown RBP7.8□□□□□ -1.16
TUBE1-207ENST00000604689 OBP2AQ9NY56 170 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 PSD3Q9NYI0 1048 aa7.8□□□□□ -1.16
TUBE1-207ENST00000604689 EVC2Q86UK5 1308 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 CCDC151A5D8V7 595 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 ORC4O43929 436 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 MGEA5O60502 916 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 POTEJP0CG39 1038 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 PPP1R2P41236 205 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 CRY1Q16526 586 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 PPP1R2P3Q6NXS1 205 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 OSTM1Q86WC4 334 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 RASSF3Q86WH2 238 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 KCT2Q8NC54 265 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 RASGRP4Q8TDF6 673 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 APOL5Q9BWW9 433 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 MTRF1LQ9UGC7 380 aaKnown RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 TRHDEQ9UKU6 1024 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 AFG3L2Q9Y4W6 797 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 POLR3AO14802 1390 aaPredicted RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 POLR3DP05423 398 aaPredicted RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 MYBL1P10243 752 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 ALAS2P22557 587 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 C1orf53Q5VUE5 145 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 EEPD1Q7L9B9 569 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 KIF1BPQ96EK5 621 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 SEC16BQ96JE7 1060 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 TSC22D3Q99576 134 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 LUC7LQ9NQ29 371 aaKnown RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 SAP30BPQ9UHR5 308 aaKnown RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 ANKRD36BQ8N2N9 1353 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 FAM83GA6ND36 823 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 GFPT2O94808 682 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 LARGE1O95461 756 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 TOP1P11387 765 aaKnown RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 SCTRP47872 440 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 PTPN12Q05209 780 aaKnown RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 AP1B1Q10567 949 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 WHAMMP3Q1A5X7 153 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 ERMP1Q7Z2K6 904 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 UNC5CLQ8IV45 518 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 PIP4K2CQ8TBX8 421 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 GPR152Q8TDT2 470 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 PTCD2Q8WV60 388 aaKnown RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 RELTQ969Z4 430 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 R3HDM2Q9Y2K5 976 aaKnown RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 ATP7AQ04656 1500 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 TROQ12816 1431 aaPredicted RBP7.79□□□□□ -1.16
TUBE1-207ENST00000604689 NPATQ14207 1427 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 NPC1L1Q9UHC9 1359 aa7.79□□□□□ -1.16
TUBE1-207ENST00000604689 FAM86C2PA6NEL3 165 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 GNAT3A8MTJ3 354 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 NCAM1P13591 858 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 PAPOLAP51003 745 aaKnown RBP7.78□□□□□ -1.16
TUBE1-207ENST00000604689 CD83Q01151 205 aa7.78□□□□□ -1.16
TUBE1-207ENST00000604689 KLHL30Q0D2K2 578 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms