RNA–Protein interactions for RNA: ENST00000604599.1

CDCA3-212, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 2,917 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-212ENST00000604599 INTS9Q9NV88 658 aaKnown RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 UBR2Q8IWV8 1755 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 CCDC88AQ3V6T2 1871 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 HGSO14964 777 aaPredicted RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 CCNT1O60563 726 aaKnown RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 IFI35P80217 286 aaPredicted RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 ADCY2Q08462 1091 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 HOOK3Q86VS8 718 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 DNAJC10Q8IXB1 793 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 KCNV2Q8TDN2 545 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 CENPTQ96BT3 561 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 EDEM3Q9BZQ6 932 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 ECT2Q9H8V3 914 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 UTP11Q9Y3A2 253 aaKnown RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 M0R2N6 131 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 RARAP10276 462 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 DDX17Q92841 729 aaKnown RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 MMTAG2Q9BU76 263 aaKnown RBP13.57□□□□□ -0.24
CDCA3-212ENST00000604599 CCDC113Q9H0I3 377 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 AZI2Q9H6S1 392 aa13.57□□□□□ -0.24
CDCA3-212ENST00000604599 BHMG1C9JSJ3 638 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-212ENST00000604599 KRT16P08779 473 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 MYBL1P10243 752 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 ASIC2Q16515 512 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 TMED8Q6PL24 325 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-212ENST00000604599 SV2BQ7L1I2 683 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 ADAT2Q7Z6V5 191 aaKnown RBP13.56□□□□□ -0.24
CDCA3-212ENST00000604599 CCDC26Q8TAB7 109 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 RIOK1Q9BRS2 568 aaKnown RBP13.56□□□□□ -0.24
CDCA3-212ENST00000604599 NUCKS1Q9H1E3 243 aaKnown RBP13.56□□□□□ -0.24
CDCA3-212ENST00000604599 ARHGEF10LQ9HCE6 1279 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 TRPM3Q9HCF6 1732 aaPredicted RBP13.56□□□□□ -0.24
CDCA3-212ENST00000604599 THRAP3Q9Y2W1 955 aaKnown RBP13.56□□□□□ -0.24
CDCA3-212ENST00000604599 ABCB11O95342 1321 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 FAM170AA1A519 330 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 CCDC188H7C350 402 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 TRAF5O00463 557 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 CES2O00748 559 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 EVI5O60447 810 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 PDE8AO60658 829 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 ALADP13716 330 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 COPB2P35606 906 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 PRPHP41219 470 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 ABL2P42684 1182 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 MMP13P45452 471 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 LRRC63Q05C16 580 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 ANKRD20A2Q5SQ80 823 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 ANKRD20A1Q5TYW2 823 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 ANKRD20A3Q5VUR7 823 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 PEX26Q7Z412 305 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 DAAM2Q86T65 1068 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
CDCA3-212ENST00000604599 GUF1Q8N442 669 aaKnown RBP13.56□□□□□ -0.24
CDCA3-212ENST00000604599 KLHL29Q96CT2 875 aa13.56□□□□□ -0.24
CDCA3-212ENST00000604599 TSPY2A6NKD2 308 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 KIF5BP33176 963 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 SLCO1A2P46721 670 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 EIF3BP55884 814 aaKnown RBP13.55□□□□□ -0.24
CDCA3-212ENST00000604599 PTK2Q05397 1052 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 SLMAPQ14BN4 828 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 COBLL1Q53SF7 1204 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 UNC13DQ70J99 1090 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 LRRC57Q8N9N7 239 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 SYN2Q92777 582 aaPredicted RBP13.55□□□□□ -0.24
CDCA3-212ENST00000604599 CALML4Q96GE6 196 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 AK8Q96MA6 479 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 CORO1CQ9ULV4 474 aaPredicted RBP13.55□□□□□ -0.24
CDCA3-212ENST00000604599 NR2E1Q9Y466 385 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 COL4A3BPQ9Y5P4 624 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 LAD1O00515 517 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 PPFIA2O75334 1257 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 CCND1P24385 295 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 SNX1Q13596 522 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 UBAP2Q5T6F2 1119 aaKnown RBP13.55□□□□□ -0.24
CDCA3-212ENST00000604599 TRIM68Q6AZZ1 485 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 TSG101Q99816 390 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 EPB41L4BQ9H329 900 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 FAM114A2Q9NRY5 505 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 ETAA1Q9NY74 926 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 TRIM33Q9UPN9 1127 aa13.55□□□□□ -0.24
CDCA3-212ENST00000604599 ARAP2Q8WZ64 1704 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 SPDYE3A6NKU9 549 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 RGS16O15492 202 aaPredicted RBP13.54□□□□□ -0.24
CDCA3-212ENST00000604599 LINGO3P0C6S8 592 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 TXKP42681 527 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 BLMHQ13867 455 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 CCDC38Q502W7 563 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 ATP8B4Q8TF62 1192 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 ZMYND12Q9H0C1 365 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 SLITRK6Q9H5Y7 841 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 BLOC1S4Q9NUP1 217 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 CASZ1Q86V15 1759 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 DLEC1Q9Y238 1755 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 CYP2D6P10635 497 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 ATP2A2P16615 1042 aaKnown RBP13.54□□□□□ -0.24
CDCA3-212ENST00000604599 LRRC14Q15048 493 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 RBBP5Q15291 538 aaKnown RBP13.54□□□□□ -0.24
CDCA3-212ENST00000604599 DENND2CQ68D51 928 aa13.54□□□□□ -0.24
CDCA3-212ENST00000604599 ZCRB1Q8TBF4 217 aaKnown RBP13.54□□□□□ -0.24
CDCA3-212ENST00000604599 MGARPQ8TDB4 240 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms