RNA–Protein interactions for RNA: ENST00000603043.1

CDCA3-211, Transcript of cell division cycle associated 3, humanhuman

TSL 2

Gene CDCA3, Length 1,995 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-211ENST00000603043 FOXD4L5Q5VV16 416 aaPredicted RBP17.53■□□□□ 0.4
CDCA3-211ENST00000603043 SWSAP1Q6NVH7 229 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 PLPPR4Q7Z2D5 763 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 ANKRD33Q7Z3H0 272 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 C7orf31Q8N865 590 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 C4orf32Q8N8J7 132 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 RDM1Q8NG50 284 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 AFAP1L1Q8TED9 768 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 FOXD4L4Q8WXT5 416 aaPredicted RBP17.53■□□□□ 0.4
CDCA3-211ENST00000603043 TRIP12Q14669 1992 aaPredicted RBP17.53■□□□□ 0.4
CDCA3-211ENST00000603043 LAD1O00515 517 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 EVI5O60447 810 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 FAM173BQ6P4H8 233 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 RNPEPQ9H4A4 650 aa17.53■□□□□ 0.4
CDCA3-211ENST00000603043 EML1O00423 815 aa17.52■□□□□ 0.4
CDCA3-211ENST00000603043 F13A1P00488 732 aa17.52■□□□□ 0.4
CDCA3-211ENST00000603043 SLC26A2P50443 739 aa17.52■□□□□ 0.4
CDCA3-211ENST00000603043 TLE2Q04725 743 aa17.52■□□□□ 0.4
CDCA3-211ENST00000603043 PTPN11Q06124 597 aaPredicted RBP17.52■□□□□ 0.4
CDCA3-211ENST00000603043 NCAPH2Q6IBW4 605 aa17.52■□□□□ 0.4
CDCA3-211ENST00000603043 SESTD1Q86VW0 696 aa17.52■□□□□ 0.4
CDCA3-211ENST00000603043 FAM126BQ8IXS8 530 aa17.52■□□□□ 0.4
CDCA3-211ENST00000603043 TOX2Q96NM4 488 aa17.52■□□□□ 0.4
CDCA3-211ENST00000603043 GABBR1Q9UBS5 961 aa17.52■□□□□ 0.4
CDCA3-211ENST00000603043 DAXXQ9UER7 740 aaPredicted RBP17.52■□□□□ 0.4
CDCA3-211ENST00000603043 DCDC2CA8MYV0 355 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 PDXDC2PQ6P474 469 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 C7orf61Q8IZ16 206 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 HDAC6Q9UBN7 1215 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 MAFBQ9Y5Q3 323 aaPredicted RBP17.51■□□□□ 0.39
CDCA3-211ENST00000603043 IGSF9BQ9UPX0 1349 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 SMIM10L2AP0DMW4 78 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 SMIM10L2BP0DMW5 78 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 TECP42680 631 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 ATP2C1P98194 919 aaPredicted RBP17.51■□□□□ 0.39
CDCA3-211ENST00000603043 TMEM266Q2M3C6 531 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 RTN4Q9NQC3 1192 aaKnown RBP17.51■□□□□ 0.39
CDCA3-211ENST00000603043 GTF2IRD1Q9UHL9 959 aa17.51■□□□□ 0.39
CDCA3-211ENST00000603043 CEP290O15078 2479 aa17.5■□□□□ 0.39
CDCA3-211ENST00000603043 POTEMA6NI47 508 aa17.5■□□□□ 0.39
CDCA3-211ENST00000603043 TLR3O15455 904 aaKnown RBP17.5■□□□□ 0.39
CDCA3-211ENST00000603043 B4GALT4O60513 344 aa17.5■□□□□ 0.39
CDCA3-211ENST00000603043 PRPHP41219 470 aa17.5■□□□□ 0.39
CDCA3-211ENST00000603043 SF3A1Q15459 793 aaKnown RBP17.5■□□□□ 0.39
CDCA3-211ENST00000603043 CKAP2LQ8IYA6 745 aa17.5■□□□□ 0.39
CDCA3-211ENST00000603043 ATP6V0A1Q93050 837 aa17.5■□□□□ 0.39
CDCA3-211ENST00000603043 TRMT13Q9NUP7 481 aaKnown RBP17.5■□□□□ 0.39
CDCA3-211ENST00000603043 CEP131Q9UPN4 1083 aa17.5■□□□□ 0.39
CDCA3-211ENST00000603043 TRPC6Q9Y210 931 aa17.5■□□□□ 0.39
CDCA3-211ENST00000603043 BRD1O95696 1058 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 BMP15O95972 392 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 CLTBP09497 229 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 PLCB4Q15147 1175 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 UGCGQ16739 394 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 FTOQ9C0B1 505 aaKnown RBP eCLIP17.49■□□□□ 0.39
CDCA3-211ENST00000603043 TRPV6Q9H1D0 765 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 POTEB3A0JP26 581 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 CD4P01730 458 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 FXR2P51116 673 aaKnown RBP eCLIP17.49■□□□□ 0.39
CDCA3-211ENST00000603043 FAAP100Q0VG06 881 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 EPHA7Q15375 998 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 GDF6Q6KF10 455 aaPredicted RBP17.49■□□□□ 0.39
CDCA3-211ENST00000603043 POTEBQ6S5H4 581 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 BANK1Q8NDB2 785 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 ATP8B4Q8TF62 1192 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 TNPO1Q92973 898 aaKnown RBP17.49■□□□□ 0.39
CDCA3-211ENST00000603043 NOD1Q9Y239 953 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 CLIC4Q9Y696 253 aa17.49■□□□□ 0.39
CDCA3-211ENST00000603043 C17orf102A2RUQ5 167 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 ATP4AP20648 1035 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 PSMC5P62195 406 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 PPFIA1Q13136 1202 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 PTGISQ16647 500 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 ARL6IP4Q66PJ3 421 aaKnown RBP17.48■□□□□ 0.39
CDCA3-211ENST00000603043 DTHD1Q6ZMT9 781 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 TRMT1LQ7Z2T5 733 aaKnown RBP17.48■□□□□ 0.39
CDCA3-211ENST00000603043 RAB34Q9BZG1 259 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 SETD4Q9NVD3 440 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 ZDHHC9Q9Y397 364 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 NRCAMQ92823 1304 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 ZNF862O60290 1169 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 P4HBP07237 508 aaKnown RBP17.48■□□□□ 0.39
CDCA3-211ENST00000603043 HOXC8P31273 242 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 QARSP47897 775 aaKnown RBP17.48■□□□□ 0.39
CDCA3-211ENST00000603043 PRKCEQ02156 737 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 CYP4A11Q02928 519 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 CEBPZQ03701 1054 aaKnown RBP17.48■□□□□ 0.39
CDCA3-211ENST00000603043 HIC1Q14526 733 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 LMBR1Q8WVP7 490 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 BBXQ8WY36 941 aaPredicted RBP17.48■□□□□ 0.39
CDCA3-211ENST00000603043 FAM167AQ96KS9 214 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 USP28Q96RU2 1077 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 EIF2AK1Q9BQI3 630 aaKnown RBP17.48■□□□□ 0.39
CDCA3-211ENST00000603043 PRDM5Q9NQX1 630 aaPredicted RBP17.48■□□□□ 0.39
CDCA3-211ENST00000603043 PDLIM7Q9NR12 457 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 NR2E3Q9Y5X4 410 aa17.48■□□□□ 0.39
CDCA3-211ENST00000603043 HBP1O60381 514 aa17.47■□□□□ 0.39
CDCA3-211ENST00000603043 OATP04181 439 aa17.47■□□□□ 0.39
CDCA3-211ENST00000603043 GNAT1P11488 350 aa17.47■□□□□ 0.39
CDCA3-211ENST00000603043 INSRRP14616 1297 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms