RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 BRINP1O60477 761 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 RLBP1P12271 317 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 NF2P35240 595 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 SOX5P35711 763 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 CRKP46108 304 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 EIF4A2Q14240 407 aaKnown RBP5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 IQCB1Q15051 598 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 SFMBT2Q5VUG0 894 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 BTNL9Q6UXG8 535 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 ERMP1Q7Z2K6 904 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 ANKLE1Q8NAG6 615 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 SLC7A3Q8WY07 619 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 KCTD13Q8WZ19 329 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 DPF3Q92784 378 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 SMARCE1Q969G3 411 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 RBM17Q96I25 401 aaKnown RBP5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 CLMNQ96JQ2 1002 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 TMEM165Q9HC07 324 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 TBC1D22BQ9NU19 505 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 PIK3R4Q99570 1358 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 A0A1B0GUA9 196 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 EME2A4GXA9 379 aaPredicted RBP5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 ATP8B1O43520 1251 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 FAM13AO94988 1023 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 SLC19A1P41440 591 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 DDR1Q08345 913 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 MOGSQ13724 837 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 STAT4Q14765 748 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 RASA2Q15283 850 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 KIF4BQ2VIQ3 1234 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 MMEL1Q495T6 779 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 FAM205BPQ63HN1 556 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 CAVIN1Q6NZI2 390 aaKnown RBP5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 LRRC31Q6UY01 552 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 CCDC149Q6ZUS6 474 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 SDCCAG8Q86SQ7 713 aaPredicted RBP5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 MAP4K3Q8IVH8 894 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 TBC1D21Q8IYX1 336 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 RTKN2Q8IZC4 609 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 MYOCDQ8IZQ8 938 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 C3orf20Q8ND61 904 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 PNMA1Q8ND90 353 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 THAP3Q8WTV1 239 aaPredicted RBP5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 HDAC7Q8WUI4 952 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 UCMAQ8WVF2 138 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 SHDQ96IW2 340 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 CLUHP3Q96NS8 147 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 ZFAND3Q9H8U3 227 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 TMEM98Q9Y2Y6 226 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 LMTK2Q8IWU2 1503 aa5.55□□□□□ -1.52
SPTBN1-206ENST00000602898 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 STAM2O75886 525 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 DGKIO75912 1065 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 RTN3O95197 1032 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 MT-CO1P00395 513 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 CYP17A1P05093 508 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 KRT13P13646 458 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 L1CAMP32004 1257 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ADD1P35611 737 aaKnown RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 IL6STP40189 918 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 MAN2A2P49641 1150 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 TUBP50607 506 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ALDH5A1P51649 535 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 LIMK1P53667 647 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 USP14P54578 494 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 FBXO38Q6PIJ6 1188 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 TMEM110Q86TL2 294 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 RIN3Q8TB24 985 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 MIPOL1Q8TD10 442 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 CLIP3Q96DZ5 547 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 GMCL1Q96IK5 515 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 CNDP1Q96KN2 507 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 SEC62Q99442 399 aaKnown RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 TCHPQ9BT92 498 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 THUMPD2Q9BTF0 503 aaKnown RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 CAPS2Q9BXY5 557 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 UBXN6Q9BZV1 441 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 LUC7LQ9NQ29 371 aaKnown RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNHIT6Q9NWK9 470 aaKnown RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 SPATA7Q9P0W8 599 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 CLIP2Q9UDT6 1046 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 FHOD1Q9Y613 1164 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 EIF3AQ14152 1382 aaKnown RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 C17orf113A0A1B0GUU1 675 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 FAM221AA4D161 298 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 GJB6O95452 261 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 POLBP06746 335 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 CLTBP09497 229 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 CENPAP49450 140 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 PKN1Q16512 942 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 SETMARQ53H47 684 aaPredicted RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNF697Q5TEC3 545 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 PDE12Q6L8Q7 609 aaKnown RBP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 RETSATQ6NUM9 610 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 OLFML1Q6UWY5 402 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 KIAA1328Q86T90 577 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 WDR63Q8IWG1 891 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 ZNF540Q8NDQ6 660 aa5.54□□□□□ -1.52
SPTBN1-206ENST00000602898 CCDC112Q8NEF3 446 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms