RNA–Protein interactions for RNA: ENST00000602140.1

RPS28-204, Transcript of ribosomal protein S28, humanhuman

TSL 1 (best)

Gene RPS28, Length 912 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-204ENST00000602140 BRPF3Q9ULD4 1205 aa15.05■□□□□ -0
RPS28-204ENST00000602140 CDY2AQ9Y6F7 541 aa15.05■□□□□ -0
RPS28-204ENST00000602140 V9GY48 417 aaPredicted RBP15.05■□□□□ -0
RPS28-204ENST00000602140 COL4A6Q14031 1691 aa15.04■□□□□ -0
RPS28-204ENST00000602140 RRN3P2A6NIE6 340 aa15.04■□□□□ -0
RPS28-204ENST00000602140 ZBTB43O43298 467 aa15.04■□□□□ -0
RPS28-204ENST00000602140 ARP10275 920 aa15.04■□□□□ -0
RPS28-204ENST00000602140 FUT2Q10981 343 aa15.04■□□□□ -0
RPS28-204ENST00000602140 ADCK5Q3MIX3 580 aa15.04■□□□□ -0
RPS28-204ENST00000602140 FBXO47Q5MNV8 452 aa15.04■□□□□ -0
RPS28-204ENST00000602140 DHX32Q7L7V1 743 aaKnown RBP15.04■□□□□ -0
RPS28-204ENST00000602140 RASEFQ8IZ41 740 aa15.04■□□□□ -0
RPS28-204ENST00000602140 FIBCD1Q8N539 461 aa15.04■□□□□ -0
RPS28-204ENST00000602140 SDF4Q9BRK5 362 aa15.04■□□□□ -0
RPS28-204ENST00000602140 EPHX3Q9H6B9 360 aa15.04■□□□□ -0
RPS28-204ENST00000602140 AZI2Q9H6S1 392 aa15.04■□□□□ -0
RPS28-204ENST00000602140 KAT6AQ92794 2004 aa15.04■□□□□ -0
RPS28-204ENST00000602140 NFASCO94856 1347 aa15.03■□□□□ -0
RPS28-204ENST00000602140 GOLGA8AA7E2F4 631 aa15.03■□□□□ -0
RPS28-204ENST00000602140 GOLGA8BA8MQT2 603 aa15.03■□□□□ -0
RPS28-204ENST00000602140 STXBP3O00186 592 aa15.03■□□□□ -0
RPS28-204ENST00000602140 ENPP3O14638 875 aa15.03■□□□□ -0
RPS28-204ENST00000602140 FOSP01100 380 aaPredicted RBP15.03■□□□□ -0
RPS28-204ENST00000602140 ADCY7P51828 1080 aa15.03■□□□□ -0
RPS28-204ENST00000602140 ACTR2P61160 394 aa15.03■□□□□ -0
RPS28-204ENST00000602140 MRPS6P82932 125 aaKnown RBP15.03■□□□□ -0
RPS28-204ENST00000602140 LEXMQ3ZCV2 418 aa15.03■□□□□ -0
RPS28-204ENST00000602140 TIGD5Q53EQ6 642 aa15.03■□□□□ -0
RPS28-204ENST00000602140 CEP55Q53EZ4 464 aa15.03■□□□□ -0
RPS28-204ENST00000602140 PPP1R18Q6NYC8 613 aa15.03■□□□□ -0
RPS28-204ENST00000602140 TSHZ1Q6ZSZ6 1077 aa15.03■□□□□ -0
RPS28-204ENST00000602140 BANK1Q8NDB2 785 aa15.03■□□□□ -0
RPS28-204ENST00000602140 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.03■□□□□ -0
RPS28-204ENST00000602140 ANO3Q9BYT9 981 aa15.03■□□□□ -0
RPS28-204ENST00000602140 FAM49AQ9H0Q0 323 aaPredicted RBP15.03■□□□□ -0
RPS28-204ENST00000602140 TMEM260Q9NX78 707 aa15.03■□□□□ -0
RPS28-204ENST00000602140 TRPC6Q9Y210 931 aa15.03■□□□□ -0
RPS28-204ENST00000602140 KLF18A0A0U1RQI7 1052 aa15.02■□□□□ -0
RPS28-204ENST00000602140 SMCO2A6NFE2 343 aa15.02■□□□□ -0
RPS28-204ENST00000602140 CTNNB1P35222 781 aa15.02■□□□□ -0
RPS28-204ENST00000602140 STAT5BP51692 787 aa15.02■□□□□ -0
RPS28-204ENST00000602140 ITGB3BPQ13352 177 aaPredicted RBP15.02■□□□□ -0
RPS28-204ENST00000602140 PLCB4Q15147 1175 aa15.02■□□□□ -0
RPS28-204ENST00000602140 TSGA10IPQ3SY00 556 aa15.02■□□□□ -0
RPS28-204ENST00000602140 TCEAL5Q5H9L2 206 aa15.02■□□□□ -0
RPS28-204ENST00000602140 IER5Q5VY09 327 aa15.02■□□□□ -0
RPS28-204ENST00000602140 TEX2Q8IWB9 1127 aa15.02■□□□□ -0
RPS28-204ENST00000602140 TRAPPC12Q8WVT3 735 aa15.02■□□□□ -0
RPS28-204ENST00000602140 KHSRPQ92945 711 aaKnown RBP eCLIP15.02■□□□□ -0
RPS28-204ENST00000602140 TNPO1Q92973 898 aaKnown RBP15.02■□□□□ -0
RPS28-204ENST00000602140 AGO3Q9H9G7 860 aaKnown RBP15.02■□□□□ -0
RPS28-204ENST00000602140 AGO4Q9HCK5 861 aaKnown RBP15.02■□□□□ -0
RPS28-204ENST00000602140 CD320Q9NPF0 282 aa15.02■□□□□ -0
RPS28-204ENST00000602140 FAM217BQ9NTX9 383 aaPredicted RBP15.02■□□□□ -0
RPS28-204ENST00000602140 BARHL2Q9NY43 387 aa15.02■□□□□ -0
RPS28-204ENST00000602140 NAP1L2Q9ULW6 460 aaPredicted RBP15.02■□□□□ -0
RPS28-204ENST00000602140 ADGRA3Q8IWK6 1321 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 hCG_1984214I3L0E3 225 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 MEIS1O00470 390 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 RPLP2P05387 115 aaKnown RBP15.01□□□□□ -0.01
RPS28-204ENST00000602140 LINC00271P0C7V0 271 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 CDC27P30260 824 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 CD52P31358 61 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 ZNF76P36508 570 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 BMPR1AP36894 532 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 SREBF1P36956 1147 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 TMEM62Q0P6H9 643 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 AP3B2Q13367 1082 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 KRT32Q14532 448 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 CENPQQ7L2Z9 268 aaPredicted RBP15.01□□□□□ -0.01
RPS28-204ENST00000602140 PLPPR4Q7Z2D5 763 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 ZNF713Q8N859 430 aaPredicted RBP15.01□□□□□ -0.01
RPS28-204ENST00000602140 NSUN3Q9H649 340 aaKnown RBP15.01□□□□□ -0.01
RPS28-204ENST00000602140 RC3H2Q9HBD1 1191 aaKnown RBP15.01□□□□□ -0.01
RPS28-204ENST00000602140 PCDHA2Q9Y5H9 948 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 TRPV2Q9Y5S1 764 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 BRWD1Q9NSI6 2320 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 NLRC5Q86WI3 1866 aa15.01□□□□□ -0.01
RPS28-204ENST00000602140 POTEB3A0JP26 581 aa15□□□□□ -0.01
RPS28-204ENST00000602140 C5orf67F2Z3F1 127 aa15□□□□□ -0.01
RPS28-204ENST00000602140 H3BQ06 376 aaPredicted RBP15□□□□□ -0.01
RPS28-204ENST00000602140 M0QZ92 97 aa15□□□□□ -0.01
RPS28-204ENST00000602140 DDX39AO00148 427 aaKnown RBP15□□□□□ -0.01
RPS28-204ENST00000602140 ATG7O95352 703 aa15□□□□□ -0.01
RPS28-204ENST00000602140 RB1P06400 928 aa15□□□□□ -0.01
RPS28-204ENST00000602140 IL9P15248 144 aa15□□□□□ -0.01
RPS28-204ENST00000602140 CLK2P49760 499 aaKnown RBP15□□□□□ -0.01
RPS28-204ENST00000602140 FGD1P98174 961 aa15□□□□□ -0.01
RPS28-204ENST00000602140 BTG3Q14201 252 aaPredicted RBP15□□□□□ -0.01
RPS28-204ENST00000602140 PTCRAQ6ISU1 281 aaPredicted RBP15□□□□□ -0.01
RPS28-204ENST00000602140 POTEBQ6S5H4 581 aa15□□□□□ -0.01
RPS28-204ENST00000602140 EP400NLQ6ZTU2 488 aa15□□□□□ -0.01
RPS28-204ENST00000602140 FAM178BQ8IXR5 827 aa15□□□□□ -0.01
RPS28-204ENST00000602140 NEK9Q8TD19 979 aa15□□□□□ -0.01
RPS28-204ENST00000602140 LINC01599Q8WXQ3 324 aa15□□□□□ -0.01
RPS28-204ENST00000602140 ZNF689Q96CS4 500 aaPredicted RBP15□□□□□ -0.01
RPS28-204ENST00000602140 PABPC5Q96DU9 382 aaKnown RBP15□□□□□ -0.01
RPS28-204ENST00000602140 C11orf84Q9BUA3 381 aaPredicted RBP15□□□□□ -0.01
RPS28-204ENST00000602140 GLT8D2Q9H1C3 349 aa15□□□□□ -0.01
RPS28-204ENST00000602140 RWDD3Q9Y3V2 267 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms