RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 RUFY2Q8WXA3 655 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 PBXIP1Q96AQ6 731 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 RPGRIP1Q96KN7 1286 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 C16orf70Q9BSU1 422 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 DSCC1Q9BVC3 393 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 MAF1Q9H063 256 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 LMAN2LQ9H0V9 348 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 KCNH6Q9H252 994 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 AZI2Q9H6S1 392 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 EHMT1Q9H9B1 1298 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 MAP3K20Q9NYL2 800 aaKnown RBP5.96□□□□□ -1.46
VRK3-226ENST00000602029 PRKAG3Q9UGI9 489 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 TUBE1Q9UJT0 475 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 SIP14410 1827 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 TRIP12Q14669 1992 aaPredicted RBP5.96□□□□□ -1.46
VRK3-226ENST00000602029 NRCAMQ92823 1304 aa5.96□□□□□ -1.46
VRK3-226ENST00000602029 PNMA6FA0A0J9YX94 578 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.95□□□□□ -1.46
VRK3-226ENST00000602029 POTEB3A0JP26 581 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 DENND3A2RUS2 1198 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 CCDC69A6NI79 296 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 SPDYE3A6NKU9 549 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 SPDYE4A6NLX3 237 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 BACH1O14867 736 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 LINC01565O15544 149 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 PPP1R11O60927 126 aaPredicted RBP5.95□□□□□ -1.46
VRK3-226ENST00000602029 STAM2O75886 525 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 RB1P06400 928 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 SRGAP2BP0DMP2 458 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 CD52P31358 61 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 KIF5BP33176 963 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 ZNF76P36508 570 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 NRIP1P48552 1158 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 HYAL1Q12794 435 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 NFX1Q12986 1120 aaKnown RBP5.95□□□□□ -1.46
VRK3-226ENST00000602029 PAK2Q13177 524 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 SMAD4Q13485 552 aaKnown RBP5.95□□□□□ -1.46
VRK3-226ENST00000602029 GRM4Q14833 912 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 GRIK4Q16099 956 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 IER5Q5VY09 327 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 TRAF7Q6Q0C0 670 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 USP17L6PQ6QN14 398 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 POTEBQ6S5H4 581 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 RUFY4Q6ZNE9 571 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 CYB5R4Q7L1T6 521 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 RNF135Q8IUD6 432 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 THNSL1Q8IYQ7 743 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 CCDC82Q8N4S0 544 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 SAMD3Q8N6K7 520 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 GIMAP8Q8ND71 665 aaPredicted RBP5.95□□□□□ -1.46
VRK3-226ENST00000602029 NCOA7Q8NI08 942 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 NEK9Q8TD19 979 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 SP7Q8TDD2 431 aaPredicted RBP5.95□□□□□ -1.46
VRK3-226ENST00000602029 TNPO1Q92973 898 aaKnown RBP5.95□□□□□ -1.46
VRK3-226ENST00000602029 SCLT1Q96NL6 688 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 PPP1R16BQ96T49 567 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 GPR20Q99678 358 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 SDF4Q9BRK5 362 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 MYL10Q9BUA6 226 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 APOL5Q9BWW9 433 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 BCAS3Q9H6U6 928 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 TLE6Q9H808 572 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 ERAP1Q9NZ08 941 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 MAD2L2Q9UI95 211 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 NAP1L2Q9ULW6 460 aaPredicted RBP5.95□□□□□ -1.46
VRK3-226ENST00000602029 PCDHB12Q9Y5F1 795 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 CDY2AQ9Y6F7 541 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 LCTP09848 1927 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 SALL3Q9BXA9 1300 aa5.95□□□□□ -1.46
VRK3-226ENST00000602029 MED19A0JLT2 244 aaPredicted RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 TBKBP1A7MCY6 615 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 SPATA31C2B4DYI2 1134 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 DDX39AO00148 427 aaKnown RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 OPLAHO14841 1288 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 MBTPS2O43462 519 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 PTPN5P54829 565 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 MRPS6P82932 125 aaKnown RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 DLX2Q07687 328 aaPredicted RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 MTMR1Q13613 665 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 LPIN1Q14693 890 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 SMAD2Q15796 467 aaKnown RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 TMEM266Q2M3C6 531 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 LLGL2Q6P1M3 1020 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 SYNE3Q6ZMZ3 975 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 TSHZ1Q6ZSZ6 1077 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 HEATR3Q7Z4Q2 680 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 TICAM2Q86XR7 235 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 RAB11FIP4Q86YS3 637 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 CKAP2LQ8IYA6 745 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 RNF169Q8NCN4 708 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 SEPT1Q8WYJ6 367 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 ATOH1Q92858 354 aaPredicted RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 CDHR1Q96JP9 859 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 OSBPL7Q9BZF2 842 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 SMARCAD1Q9H4L7 1026 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 PSTPIP2Q9H939 334 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 ENTPD7Q9NQZ7 604 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 AAASQ9NRG9 546 aa5.94□□□□□ -1.46
VRK3-226ENST00000602029 BARX2Q9UMQ3 279 aaPredicted RBP5.94□□□□□ -1.46
VRK3-226ENST00000602029 PCDHB7Q9Y5E2 793 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms