RNA–Protein interactions for RNA: ENST00000600791.5

SHKBP1-226, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 494 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-226ENST00000600791 MRPS5P82675 430 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 ITGB3BPQ13352 177 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 MARCH8Q5T0T0 291 aa17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 RPAINQ86UA6 219 aa17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 GDPD5Q8WTR4 605 aa17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 TGS1Q96RS0 853 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 SDF4Q9BRK5 362 aa17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 TSPYL2Q9H2G4 693 aaPredicted RBP17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 AGO4Q9HCK5 861 aaKnown RBP17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 INSL6Q9Y581 213 aa17.16■□□□□ 0.34
SHKBP1-226ENST00000600791 MEIS1O00470 390 aa17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 REC8O95072 547 aa17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 ACTR2P61160 394 aa17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 ERVK-21P61565 698 aa17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 HTRA4P83105 476 aaPredicted RBP17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 MGAT3Q09327 533 aa17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 SKIV2LQ15477 1246 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 FBXL16Q8N461 479 aa17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 APBB2Q92870 758 aa17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 AGXT2Q9BYV1 514 aa17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 IFIH1Q9BYX4 1025 aaKnown RBP17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 AZI2Q9H6S1 392 aa17.15■□□□□ 0.34
SHKBP1-226ENST00000600791 COL4A6Q14031 1691 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 ESYT2A0FGR8 921 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 ADAMTS3O15072 1205 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 GHRP10912 638 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 IGBP1P78318 339 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 TFF2Q03403 129 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 PKN1Q16512 942 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 JAKMIP3Q5VZ66 844 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 RSPH3Q86UC2 560 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 SP7Q8TDD2 431 aaPredicted RBP17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 DNAJB3Q8WWF6 145 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 CRYGNQ8WXF5 182 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 ZBTB10Q96DT7 871 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 SUGCTQ9HAC7 445 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 BRWD1Q9NSI6 2320 aa17.14■□□□□ 0.33
SHKBP1-226ENST00000600791 FAM86B1E9PN63 330 aa17.13■□□□□ 0.33
SHKBP1-226ENST00000600791 FAM86B2P0C5J1 330 aa17.13■□□□□ 0.33
SHKBP1-226ENST00000600791 INSRRP14616 1297 aa17.13■□□□□ 0.33
SHKBP1-226ENST00000600791 NIPA1Q7RTP0 329 aa17.13■□□□□ 0.33
SHKBP1-226ENST00000600791 ADAMTS19Q8TE59 1207 aa17.13■□□□□ 0.33
SHKBP1-226ENST00000600791 PHKBQ93100 1093 aa17.13■□□□□ 0.33
SHKBP1-226ENST00000600791 TOP1MTQ969P6 601 aa17.13■□□□□ 0.33
SHKBP1-226ENST00000600791 ZMYND12Q9H0C1 365 aa17.13■□□□□ 0.33
SHKBP1-226ENST00000600791 TRPC6Q9Y210 931 aa17.13■□□□□ 0.33
SHKBP1-226ENST00000600791 IGLV3-22A0A075B6J6 115 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 RRN3P2A6NIE6 340 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 DDX39AO00148 427 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 PRPF3O43395 683 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 UPP2O95045 317 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 CCNE2O96020 404 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 PSMA5P28066 241 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 ZNF76P36508 570 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 STAT5BP51692 787 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 LPIN1Q14693 890 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 PLCB4Q15147 1175 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 NTRK3Q16288 839 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 PLPPR4Q7Z2D5 763 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 REXO1Q8N1G1 1221 aaKnown RBP17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 CCDC12Q8WUD4 166 aaPredicted RBP17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 YME1L1Q96TA2 773 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 C17orf80Q9BSJ5 609 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 C6orf50Q9HD87 102 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 LMCD1Q9NZU5 365 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 CDY2AQ9Y6F7 541 aa17.12■□□□□ 0.33
SHKBP1-226ENST00000600791 IGKV6D-21A0A0A0MT36 114 aa17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 PPFIA3O75145 1194 aa17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 ATG7O95352 703 aa17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 CYP3A4P08684 503 aa17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 EVCP57679 992 aa17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 MRPS6P82932 125 aaKnown RBP17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 FBXO47Q5MNV8 452 aa17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 PLA2G4DQ86XP0 818 aa17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 IL27Q8NEV9 243 aa17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 TRAPPC12Q8WVT3 735 aa17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 RNF26Q9BY78 433 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 FAM49AQ9H0Q0 323 aaPredicted RBP17.11■□□□□ 0.33
SHKBP1-226ENST00000600791 POTEB3A0JP26 581 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 TNFRSF10AO00220 468 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 DHX15O43143 795 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 EPB41L2O43491 1005 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 PDIA3P30101 505 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 SLC26A2P50443 739 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 KCNQ1P51787 676 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 AKAP17AQ02040 695 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 AAK1Q2M2I8 961 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 MCTP2Q6DN12 878 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 POTEBQ6S5H4 581 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 ABHD15Q6UXT9 468 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 FBXO22Q8NEZ5 403 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 SLC26A6Q9BXS9 759 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 NCOA5Q9HCD5 579 aaKnown RBP17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 NLRC5Q86WI3 1866 aa17.1■□□□□ 0.33
SHKBP1-226ENST00000600791 TCF20Q9UGU0 1960 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-226ENST00000600791 IPO5O00410 1097 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-226ENST00000600791 RPLP2P05387 115 aaKnown RBP17.09■□□□□ 0.33
SHKBP1-226ENST00000600791 BMP1P13497 986 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 158.5 ms