RNA–Protein interactions for RNA: ENST00000600284.5

VRK3-221, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 768 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-221ENST00000600284 BICD2Q8TD16 824 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 CRYGNQ8WXF5 182 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 ARNTL2Q8WYA1 636 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 CERS4Q9HA82 394 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 ZSWIM6Q9HCJ5 1215 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 THEGQ9P2T0 379 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 TUBE1Q9UJT0 475 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 MTCH2Q9Y6C9 303 aa18.01■□□□□ 0.47
VRK3-221ENST00000600284 LCHNA4D1U4 455 aa18■□□□□ 0.47
VRK3-221ENST00000600284 EPOPA6NHQ4 379 aa18■□□□□ 0.47
VRK3-221ENST00000600284 STAT5BP51692 787 aa18■□□□□ 0.47
VRK3-221ENST00000600284 HTRA4P83105 476 aaPredicted RBP18■□□□□ 0.47
VRK3-221ENST00000600284 ITGB3BPQ13352 177 aaPredicted RBP18■□□□□ 0.47
VRK3-221ENST00000600284 MARCH8Q5T0T0 291 aa18■□□□□ 0.47
VRK3-221ENST00000600284 JAKMIP3Q5VZ66 844 aa18■□□□□ 0.47
VRK3-221ENST00000600284 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18■□□□□ 0.47
VRK3-221ENST00000600284 REXO1Q8N1G1 1221 aaKnown RBP18■□□□□ 0.47
VRK3-221ENST00000600284 TOP1MTQ969P6 601 aa18■□□□□ 0.47
VRK3-221ENST00000600284 TGS1Q96RS0 853 aaKnown RBP18■□□□□ 0.47
VRK3-221ENST00000600284 TM6SF1Q9BZW5 370 aa18■□□□□ 0.47
VRK3-221ENST00000600284 LMCD1Q9NZU5 365 aa18■□□□□ 0.47
VRK3-221ENST00000600284 KAT6AQ92794 2004 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 RFXAPO00287 272 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 CHRNA1P02708 482 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 INSRRP14616 1297 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 ERVK-21P61565 698 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 MGAT3Q09327 533 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 ERICH6BQ5W0A0 696 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 RUFY4Q6ZNE9 571 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 PLA2G4DQ86XP0 818 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 MYOCDQ8IZQ8 938 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 CCDC148Q8NFR7 591 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 PHKBQ93100 1093 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 IFIH1Q9BYX4 1025 aaKnown RBP17.99■□□□□ 0.47
VRK3-221ENST00000600284 PRDM6Q9NQX0 595 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 SH3GLB2Q9NR46 395 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 CYP46A1Q9Y6A2 500 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 PTPRSQ13332 1948 aa17.99■□□□□ 0.47
VRK3-221ENST00000600284 CUL9Q8IWT3 2517 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 IGLV3-22A0A075B6J6 115 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 IGKV6D-21A0A0A0MT36 114 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 LINC01553A4QN01 128 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 FAM86B1E9PN63 330 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 FAM86B2P0C5J1 330 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 MRPS5P82675 430 aaKnown RBP17.98■□□□□ 0.47
VRK3-221ENST00000600284 SETQ01105 290 aaPredicted RBP17.98■□□□□ 0.47
VRK3-221ENST00000600284 TOB2Q14106 344 aaPredicted RBP17.98■□□□□ 0.47
VRK3-221ENST00000600284 PLCB4Q15147 1175 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 ABHD15Q6UXT9 468 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 ZNF274Q96GC6 653 aaPredicted RBP17.98■□□□□ 0.47
VRK3-221ENST00000600284 ASB2Q96Q27 587 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 OSBPL7Q9BZF2 842 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 TBC1D22BQ9NU19 505 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 SQORQ9Y6N5 450 aa17.98■□□□□ 0.47
VRK3-221ENST00000600284 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.97■□□□□ 0.47
VRK3-221ENST00000600284 IPO5O00410 1097 aaKnown RBP17.97■□□□□ 0.47
VRK3-221ENST00000600284 DHX15O43143 795 aaKnown RBP17.97■□□□□ 0.47
VRK3-221ENST00000600284 LPXNO60711 386 aa17.97■□□□□ 0.47
VRK3-221ENST00000600284 CIITAP33076 1130 aa17.97■□□□□ 0.47
VRK3-221ENST00000600284 GRB10Q13322 594 aa17.97■□□□□ 0.47
VRK3-221ENST00000600284 FAM117BQ6P1L5 589 aa17.97■□□□□ 0.47
VRK3-221ENST00000600284 FAM43BQ6ZT52 329 aaPredicted RBP17.97■□□□□ 0.47
VRK3-221ENST00000600284 SP7Q8TDD2 431 aaPredicted RBP17.97■□□□□ 0.47
VRK3-221ENST00000600284 DNAJB3Q8WWF6 145 aa17.97■□□□□ 0.47
VRK3-221ENST00000600284 SLC26A6Q9BXS9 759 aa17.97■□□□□ 0.47
VRK3-221ENST00000600284 TRPC6Q9Y210 931 aa17.97■□□□□ 0.47
VRK3-221ENST00000600284 PCDHA2Q9Y5H9 948 aa17.97■□□□□ 0.47
VRK3-221ENST00000600284 POTEB3A0JP26 581 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 IGBP1P78318 339 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 CCT2P78371 535 aaKnown RBP17.96■□□□□ 0.47
VRK3-221ENST00000600284 IER5Q5VY09 327 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 FAM160B1Q5W0V3 765 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 POTEBQ6S5H4 581 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 TRIM22Q8IYM9 498 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 FAM177A1Q8N128 213 aaPredicted RBP17.96■□□□□ 0.47
VRK3-221ENST00000600284 MICALL1Q8N3F8 863 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 NME8Q8N427 588 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 SAMD11Q96NU1 681 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 PPP4R2Q9NY27 417 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 MICAL3Q7RTP6 2002 aa17.96■□□□□ 0.47
VRK3-221ENST00000600284 SMIM35A0A1B0GVV1 85 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 HBP1O60381 514 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 CCNE2O96020 404 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 GHRP10912 638 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 MRPS6P82932 125 aaKnown RBP17.95■□□□□ 0.46
VRK3-221ENST00000600284 SSRP1Q08945 709 aaKnown RBP17.95■□□□□ 0.46
VRK3-221ENST00000600284 LPIN1Q14693 890 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 AAK1Q2M2I8 961 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 FBXO47Q5MNV8 452 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 ZNF746Q6NUN9 644 aaPredicted RBP17.95■□□□□ 0.46
VRK3-221ENST00000600284 MIS18BP1Q6P0N0 1132 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 TSHZ1Q6ZSZ6 1077 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 SPRED2Q7Z698 418 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 SMAP1Q8IYB5 467 aaPredicted RBP17.95■□□□□ 0.46
VRK3-221ENST00000600284 ZNF577Q9BSK1 485 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 SUGCTQ9HAC7 445 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 NCOA5Q9HCD5 579 aaKnown RBP17.95■□□□□ 0.46
VRK3-221ENST00000600284 COG5Q9UP83 839 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 CDY2AQ9Y6F7 541 aa17.95■□□□□ 0.46
VRK3-221ENST00000600284 VCANP13611 3396 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms