RNA–Protein interactions for RNA: ENST00000598422.1

XRCC1-208, Transcript of X-ray repair cross complementing 1, humanhuman

TSL 2

Gene XRCC1, Length 701 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1-208ENST00000598422 MBTPS1Q14703 1052 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 GPNMBQ14956 572 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 GALNT17Q6IS24 598 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 CRYGNQ8WXF5 182 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 SEPT8Q92599 483 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 UIMC1Q96RL1 719 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 PCYT2Q99447 389 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 ZBED2Q9BTP6 218 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 PRDM12Q9H4Q4 367 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 TBC1D22BQ9NU19 505 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 TANC1Q9C0D5 1861 aa16.6■□□□□ 0.25
XRCC1-208ENST00000598422 RRN3P2A6NIE6 340 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 TLL1O43897 1013 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 PFKFB2O60825 505 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 CCNE2O96020 404 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 RPLP2P05387 115 aaKnown RBP16.59■□□□□ 0.25
XRCC1-208ENST00000598422 CA3P07451 260 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 INSRRP14616 1297 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 SLC26A2P50443 739 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 ADAM17P78536 824 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 PLPPR4Q7Z2D5 763 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 BLIDQ8IZY5 108 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 DBF4BQ8NFT6 615 aa16.59■□□□□ 0.25
XRCC1-208ENST00000598422 POTEB3A0JP26 581 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 CIITAP33076 1130 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 DEFB103AP81534 67 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 KRT76Q01546 638 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 PLCB4Q15147 1175 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 PDXDC2PQ6P474 469 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 POTEBQ6S5H4 581 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 RUFY4Q6ZNE9 571 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 SMAP1Q8IYB5 467 aaPredicted RBP16.58■□□□□ 0.24
XRCC1-208ENST00000598422 DAGLBQ8NCG7 672 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 TBCKQ8TEA7 893 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 WASF1Q92558 559 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 FAM49AQ9H0Q0 323 aaPredicted RBP16.58■□□□□ 0.24
XRCC1-208ENST00000598422 ZNF302Q9NR11 478 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 SAMM50Q9Y512 469 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 STK36Q9NRP7 1315 aa16.58■□□□□ 0.24
XRCC1-208ENST00000598422 MBLAC1A4D2B0 266 aaPredicted RBP16.57■□□□□ 0.24
XRCC1-208ENST00000598422 ATG7O95352 703 aa16.57■□□□□ 0.24
XRCC1-208ENST00000598422 AMHP03971 560 aa16.57■□□□□ 0.24
XRCC1-208ENST00000598422 USP11P51784 963 aa16.57■□□□□ 0.24
XRCC1-208ENST00000598422 NEK4P51957 841 aa16.57■□□□□ 0.24
XRCC1-208ENST00000598422 PLEKHG4Q58EX7 1191 aa16.57■□□□□ 0.24
XRCC1-208ENST00000598422 ZNF746Q6NUN9 644 aaPredicted RBP16.57■□□□□ 0.24
XRCC1-208ENST00000598422 KRT25Q7Z3Z0 450 aa16.57■□□□□ 0.24
XRCC1-208ENST00000598422 RPAINQ86UA6 219 aa16.57■□□□□ 0.24
XRCC1-208ENST00000598422 AIFM3Q96NN9 605 aa16.57■□□□□ 0.24
XRCC1-208ENST00000598422 LAMA2P24043 3122 aaKnown RBP16.56■□□□□ 0.24
XRCC1-208ENST00000598422 CCDC194A0A1B0GVG4 234 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 WDR64B1ANS9 1081 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 M0QZ92 97 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 DHX15O43143 795 aaKnown RBP16.56■□□□□ 0.24
XRCC1-208ENST00000598422 GAS7O60861 476 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 PSAPP07602 524 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 IGFBP4P22692 258 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 NONOQ15233 471 aaKnown RBP eCLIP16.56■□□□□ 0.24
XRCC1-208ENST00000598422 TCTN1Q2MV58 587 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 FAM26DQ5JW98 314 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 FAM117BQ6P1L5 589 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 ABHD15Q6UXT9 468 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 CCDC60Q8IWA6 550 aaPredicted RBP16.56■□□□□ 0.24
XRCC1-208ENST00000598422 MYOCDQ8IZQ8 938 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 ATP8B4Q8TF62 1192 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 DNAJB3Q8WWF6 145 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 APBB2Q92870 758 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 IL17RAQ96F46 866 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 IFIH1Q9BYX4 1025 aaKnown RBP16.56■□□□□ 0.24
XRCC1-208ENST00000598422 ORC3Q9UBD5 711 aaPredicted RBP16.56■□□□□ 0.24
XRCC1-208ENST00000598422 KCNJ14Q9UNX9 436 aa16.56■□□□□ 0.24
XRCC1-208ENST00000598422 IGKV6D-21A0A0A0MT36 114 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 HBP1O60381 514 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 GHRP10912 638 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 MRPS6P82932 125 aaKnown RBP16.55■□□□□ 0.24
XRCC1-208ENST00000598422 MARCH8Q5T0T0 291 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 LRCH2Q5VUJ6 765 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 IER5Q5VY09 327 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 SWSAP1Q6NVH7 229 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 TMCO2Q7Z6W1 182 aaPredicted RBP16.55■□□□□ 0.24
XRCC1-208ENST00000598422 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 TRAPPC12Q8WVT3 735 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 GTF3C6Q969F1 213 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 LENG9Q96B70 501 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 TEKT3Q9BXF9 490 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 BRMS1Q9HCU9 246 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 PCDHA10Q9Y5I2 948 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 CDY2AQ9Y6F7 541 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 MYH7BA7E2Y1 1941 aa16.55■□□□□ 0.24
XRCC1-208ENST00000598422 MSH4O15457 936 aa16.54■□□□□ 0.24
XRCC1-208ENST00000598422 CHMP2AO43633 222 aa16.54■□□□□ 0.24
XRCC1-208ENST00000598422 GJB5O95377 273 aa16.54■□□□□ 0.24
XRCC1-208ENST00000598422 SEC24BO95487 1268 aa16.54■□□□□ 0.24
XRCC1-208ENST00000598422 CHRNA1P02708 482 aa16.54■□□□□ 0.24
XRCC1-208ENST00000598422 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.54■□□□□ 0.24
XRCC1-208ENST00000598422 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.54■□□□□ 0.24
XRCC1-208ENST00000598422 ZBTB10Q96DT7 871 aa16.54■□□□□ 0.24
XRCC1-208ENST00000598422 RIT2Q99578 217 aa16.54■□□□□ 0.24
XRCC1-208ENST00000598422 GABBR1Q9UBS5 961 aa16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms