RNA–Protein interactions for RNA: ENST00000596549.5

LIG1-212, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-212ENST00000596549 MARCH8Q5T0T0 291 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.88□□□□□ -0.03
LIG1-212ENST00000596549 NIPA1Q7RTP0 329 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 DBF4BQ8NFT6 615 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 CCDC12Q8WUD4 166 aaPredicted RBP14.88□□□□□ -0.03
LIG1-212ENST00000596549 ZBTB10Q96DT7 871 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 GAS2L1Q99501 681 aaPredicted RBP14.88□□□□□ -0.03
LIG1-212ENST00000596549 C6orf50Q9HD87 102 aa14.88□□□□□ -0.03
LIG1-212ENST00000596549 CUL9Q8IWT3 2517 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 ABHD14A-ACY1A0A1B0GW23 586 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 MBLAC1A4D2B0 266 aaPredicted RBP14.87□□□□□ -0.03
LIG1-212ENST00000596549 GNAT1P11488 350 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 FAM26DQ5JW98 314 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 PLA2G4DQ86XP0 818 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 CCDC148Q8NFR7 591 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 GLG1Q92896 1179 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 SDF4Q9BRK5 362 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 SMARCAD1Q9H4L7 1026 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 CERS4Q9HA82 394 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 TUBE1Q9UJT0 475 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 MYO9BQ13459 2157 aa14.87□□□□□ -0.03
LIG1-212ENST00000596549 IGKV6D-21A0A0A0MT36 114 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 RFXAPO00287 272 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 DHX15O43143 795 aaKnown RBP14.86□□□□□ -0.03
LIG1-212ENST00000596549 TLL1O43897 1013 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 ATG7O95352 703 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 GJB5O95377 273 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 STK3Q13188 491 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 PLCB4Q15147 1175 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 NPY5RQ15761 445 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 CCDC60Q8IWA6 550 aaPredicted RBP14.86□□□□□ -0.03
LIG1-212ENST00000596549 TRAPPC12Q8WVT3 735 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 LENG9Q96B70 501 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 ZNF274Q96GC6 653 aaPredicted RBP14.86□□□□□ -0.03
LIG1-212ENST00000596549 UIMC1Q96RL1 719 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 PRDM6Q9NQX0 595 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 ARID2Q68CP9 1835 aa14.86□□□□□ -0.03
LIG1-212ENST00000596549 EFCAB14O75071 495 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 CHRNA1P02708 482 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 INSRRP14616 1297 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 GNA11P29992 359 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 ZNF76P36508 570 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 IGBP1P78318 339 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 SETQ01105 290 aaPredicted RBP14.85□□□□□ -0.03
LIG1-212ENST00000596549 AKAP17AQ02040 695 aaKnown RBP14.85□□□□□ -0.03
LIG1-212ENST00000596549 SCRN1Q12765 414 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 IKBKEQ14164 716 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 TAF2Q6P1X5 1199 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 RPAINQ86UA6 219 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 AIFM3Q96NN9 605 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 PDRG1Q9NUG6 133 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 VCANP13611 3396 aa14.85□□□□□ -0.03
LIG1-212ENST00000596549 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.84□□□□□ -0.03
LIG1-212ENST00000596549 M0R2N6 131 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 IPO5O00410 1097 aaKnown RBP14.84□□□□□ -0.03
LIG1-212ENST00000596549 DTNBO60941 627 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 IGFBP4P22692 258 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 CIITAP33076 1130 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 MCTP2Q6DN12 878 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 FAM117BQ6P1L5 589 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 ABHD15Q6UXT9 468 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 PLPPR4Q7Z2D5 763 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 DNAJB3Q8WWF6 145 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 COL25A1Q9BXS0 654 aaPredicted RBP14.84□□□□□ -0.03
LIG1-212ENST00000596549 AZI2Q9H6S1 392 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 SH3GLB2Q9NR46 395 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 TRPC6Q9Y210 931 aa14.84□□□□□ -0.03
LIG1-212ENST00000596549 SPTBN5Q9NRC6 3674 aaKnown RBP14.84□□□□□ -0.03
LIG1-212ENST00000596549 KIF28PB7ZC32 967 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 DEXIO95424 95 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 GHRP10912 638 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 STAT5BP51692 787 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 SSRP1Q08945 709 aaKnown RBP14.83□□□□□ -0.04
LIG1-212ENST00000596549 LPIN1Q14693 890 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 PRR16Q569H4 304 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 KRT40Q6A162 431 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 TRIM22Q8IYM9 498 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 MYOCDQ8IZQ8 938 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 BICD2Q8TD16 824 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 PPM1EQ8WY54 764 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 ARNTL2Q8WYA1 636 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 SEPT8Q92599 483 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 IL17RAQ96F46 866 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 ZNF577Q9BSK1 485 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 IFIH1Q9BYX4 1025 aaKnown RBP14.83□□□□□ -0.04
LIG1-212ENST00000596549 TPCN1Q9ULQ1 816 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 CDY2AQ9Y6F7 541 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 IGSF9BQ9UPX0 1349 aa14.83□□□□□ -0.04
LIG1-212ENST00000596549 FNDC1Q4ZHG4 1894 aaPredicted RBP14.82□□□□□ -0.04
LIG1-212ENST00000596549 TTC3P53804 2025 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 LINC01553A4QN01 128 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 CPLX1O14810 134 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 LPXNO60711 386 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 LARGE1O95461 756 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 ATP4AP20648 1035 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 NLRP5P59047 1200 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 ANAPC15P60006 121 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 HTRA4P83105 476 aaPredicted RBP14.82□□□□□ -0.04
LIG1-212ENST00000596549 FBXO47Q5MNV8 452 aa14.82□□□□□ -0.04
LIG1-212ENST00000596549 DAGLBQ8NCG7 672 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms