RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 ZNF746Q6NUN9 644 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 MIS18BP1Q6P0N0 1132 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 KRT25Q7Z3Z0 450 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 RPAINQ86UA6 219 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 RASGRP4Q8TDF6 673 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 TTYH1Q9H313 450 aaPredicted RBP20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 ZNF576Q9H609 170 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 TUBE1Q9UJT0 475 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 TELO2Q9Y4R8 837 aa20.13■□□□□ 0.81
SHKBP1-204ENST00000594862 KIF28PB7ZC32 967 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 MARK3P27448 753 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 IKBKEQ14164 716 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 PRR16Q569H4 304 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 TRAF7Q6Q0C0 670 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 WNT8BQ93098 351 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 GTF3C6Q969F1 213 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 FAM161BQ96MY7 647 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 SLC28A3Q9HAS3 691 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 TRPC6Q9Y210 931 aa20.12■□□□□ 0.81
SHKBP1-204ENST00000594862 MBLAC1A4D2B0 266 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-204ENST00000594862 GRXCR1A8MXD5 290 aa20.11■□□□□ 0.81
SHKBP1-204ENST00000594862 BACH1O14867 736 aa20.11■□□□□ 0.81
SHKBP1-204ENST00000594862 NBNO60934 754 aa20.11■□□□□ 0.81
SHKBP1-204ENST00000594862 MOXD1Q6UVY6 613 aa20.11■□□□□ 0.81
SHKBP1-204ENST00000594862 RIT2Q99578 217 aa20.11■□□□□ 0.81
SHKBP1-204ENST00000594862 CDX2Q99626 313 aaPredicted RBP20.11■□□□□ 0.81
SHKBP1-204ENST00000594862 GBF1Q92538 1859 aa20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 IGKV6D-21A0A0A0MT36 114 aa20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 DDX39AO00148 427 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 DHX15O43143 795 aaKnown RBP20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 NONOQ15233 471 aaKnown RBP eCLIP20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 FAM26DQ5JW98 314 aa20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 ABHD15Q6UXT9 468 aa20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 TBCKQ8TEA7 893 aa20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 SEPT8Q92599 483 aa20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 APBB2Q92870 758 aa20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 PCYT2Q99447 389 aa20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 BRMS1Q9HCU9 246 aa20.1■□□□□ 0.81
SHKBP1-204ENST00000594862 COL1A2P08123 1366 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 CCDC194A0A1B0GVG4 234 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 ADAMTS3O15072 1205 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 CCNE2O96020 404 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 PSAPP07602 524 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 INSRRP14616 1297 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 PBX2P40425 430 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 WDR5P61964 334 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 GPNMBQ14956 572 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 HERC6Q8IVU3 1022 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 IL27Q8NEV9 243 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 LENG9Q96B70 501 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 NAP1L4Q99733 375 aaKnown RBP20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 PHF20Q9BVI0 1012 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 ZNF302Q9NR11 478 aa20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 ORC3Q9UBD5 711 aaPredicted RBP20.09■□□□□ 0.81
SHKBP1-204ENST00000594862 CYP3A7-CYP3A51PA0A087WV96 503 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 POTEB3A0JP26 581 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 WDR64B1ANS9 1081 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 M0R2N6 131 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 HBP1O60381 514 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 FOSL2P15408 326 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 CYP3A7P24462 503 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 SFNP31947 248 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 MBTPS1Q14703 1052 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 PLCB4Q15147 1175 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 ME3Q16798 604 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 Q4G0T1 1027 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 PLEKHG4Q58EX7 1191 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 PPP2R2DQ66LE6 453 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 POTEBQ6S5H4 581 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 ATP8B4Q8TF62 1192 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 AIFM3Q96NN9 605 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 COL25A1Q9BXS0 654 aaPredicted RBP20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 PCDHA10Q9Y5I2 948 aa20.08■□□□□ 0.81
SHKBP1-204ENST00000594862 SPTBN5Q9NRC6 3674 aaKnown RBP20.08■□□□□ 0.8
SHKBP1-204ENST00000594862 TET1Q8NFU7 2136 aa20.08■□□□□ 0.8
SHKBP1-204ENST00000594862 M0QZ92 97 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 GAS7O60861 476 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 SEC24BO95487 1268 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 CTSHP09668 335 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 GCFC2P16383 781 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 JAK3P52333 1124 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 NPY5RQ15761 445 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 C8orf34Q49A92 452 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 PDXDC2PQ6P474 469 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 FAM43BQ6ZT52 329 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 RDM1Q8NG50 284 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 SLC5A5Q92911 643 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 FAM167AQ96KS9 214 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 GAS2L1Q99501 681 aaPredicted RBP20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 TEKT3Q9BXF9 490 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 NKX2-4Q9H2Z4 354 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 CEP131Q9UPN4 1083 aa20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 YBX2Q9Y2T7 364 aaKnown RBP20.07■□□□□ 0.8
SHKBP1-204ENST00000594862 MSH4O15457 936 aa20.06■□□□□ 0.8
SHKBP1-204ENST00000594862 CTDNEP1O95476 244 aa20.06■□□□□ 0.8
SHKBP1-204ENST00000594862 AMHP03971 560 aa20.06■□□□□ 0.8
SHKBP1-204ENST00000594862 IGBP1P78318 339 aa20.06■□□□□ 0.8
SHKBP1-204ENST00000594862 ZNF484Q5JVG2 852 aa20.06■□□□□ 0.8
SHKBP1-204ENST00000594862 MARCH8Q5T0T0 291 aa20.06■□□□□ 0.8
SHKBP1-204ENST00000594862 LRCH2Q5VUJ6 765 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms