RNA–Protein interactions for RNA: ENST00000592435.1

PRKCSH-215, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 358 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-215ENST00000592435 MKRN4PQ13434 485 aaPredicted RBP11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 GRIK4Q16099 956 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 MARCH8Q5T0T0 291 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 RSPH3Q86UC2 560 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 PLA2G4DQ86XP0 818 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 TRIM22Q8IYM9 498 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 FAM177A1Q8N128 213 aaPredicted RBP11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 CCDC148Q8NFR7 591 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 SEPT8Q92599 483 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 UPF3BQ9BZI7 483 aaKnown RBP11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 TBC1D22BQ9NU19 505 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 PDRG1Q9NUG6 133 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 TUBE1Q9UJT0 475 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 CHD7Q9P2D1 2997 aa11.04□□□□□ -0.64
PRKCSH-215ENST00000592435 CPLX1O14810 134 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 ADAMTS3O15072 1205 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 DHX15O43143 795 aaKnown RBP11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 EIF5BO60841 1220 aaKnown RBP11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 CHRNA1P02708 482 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 AMHP03971 560 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 INSRRP14616 1297 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 IGFBP4P22692 258 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 USP11P51784 963 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 ANAPC15P60006 121 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 SETQ01105 290 aaPredicted RBP11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 CPLX2Q6PUV4 134 aaKnown RBP11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 ABHD15Q6UXT9 468 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 APBB2Q92870 758 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 VPS54Q9P1Q0 977 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 INSL6Q9Y581 213 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 TRIP12Q14669 1992 aaPredicted RBP11.03□□□□□ -0.64
PRKCSH-215ENST00000592435 POTEB3A0JP26 581 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 PPFIA3O75145 1194 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 CCNE2O96020 404 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 CTSHP09668 335 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 NLRP5P59047 1200 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 PLCB4Q15147 1175 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 GALNT17Q6IS24 598 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 POTEBQ6S5H4 581 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 RUFY4Q6ZNE9 571 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 TMCO2Q7Z6W1 182 aaPredicted RBP11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 USP38Q8NB14 1042 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 DNAJB3Q8WWF6 145 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 ZNF577Q9BSK1 485 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 IFIH1Q9BYX4 1025 aaKnown RBP11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 C22orf23Q9BZE7 217 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 OSBPL7Q9BZF2 842 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 PCDHA2Q9Y5H9 948 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 TET1Q8NFU7 2136 aa11.02□□□□□ -0.65
PRKCSH-215ENST00000592435 LCHNA4D1U4 455 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 BACH1O14867 736 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 HBP1O60381 514 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 ARHGEF15O94989 841 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 DEXIO95424 95 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 IGBP1P78318 339 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 HTRA4P83105 476 aaPredicted RBP11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 MGAT3Q09327 533 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 PRR16Q569H4 304 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 IER5Q5VY09 327 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 FAM160B1Q5W0V3 765 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 ZNF746Q6NUN9 644 aaPredicted RBP11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 SWSAP1Q6NVH7 229 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 MIS18BP1Q6P0N0 1132 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 FAM43BQ6ZT52 329 aaPredicted RBP11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 SMAP1Q8IYB5 467 aaPredicted RBP11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 NME8Q8N427 588 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 RASGRP4Q8TDF6 673 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 ARNTL2Q8WYA1 636 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 TOP1MTQ969P6 601 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 IL17RAQ96F46 866 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 LARP6Q9BRS8 491 aaKnown RBP11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 CERS4Q9HA82 394 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 PCDHA4Q9UN74 947 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 TRPC6Q9Y210 931 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 SQORQ9Y6N5 450 aa11.01□□□□□ -0.65
PRKCSH-215ENST00000592435 DOCK5Q9H7D0 1870 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 SMIM35A0A1B0GVV1 85 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11□□□□□ -0.65
PRKCSH-215ENST00000592435 LINC01553A4QN01 128 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 DDX39AO00148 427 aaKnown RBP11□□□□□ -0.65
PRKCSH-215ENST00000592435 RFXAPO00287 272 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 GTPBP6O43824 516 aaPredicted RBP11□□□□□ -0.65
PRKCSH-215ENST00000592435 EDIL3O43854 480 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 CDKL5O76039 1030 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 KLRC1P26715 233 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 ERVK-21P61565 698 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 KRT76Q01546 638 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 STK3Q13188 491 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 LPIN1Q14693 890 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 ANKRD1Q15327 319 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 FBXO47Q5MNV8 452 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 PDXDC2PQ6P474 469 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 CCDC60Q8IWA6 550 aaPredicted RBP11□□□□□ -0.65
PRKCSH-215ENST00000592435 MYOCDQ8IZQ8 938 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 DAGLBQ8NCG7 672 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 ATP8B4Q8TF62 1192 aa11□□□□□ -0.65
PRKCSH-215ENST00000592435 ATXN2LQ8WWM7 1075 aaKnown RBP11□□□□□ -0.65
PRKCSH-215ENST00000592435 PPM1EQ8WY54 764 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 90.6 ms