RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 MGAT3Q09327 533 aa21.55■■□□□ 1.04
CCDC43-205ENST00000592333 MARCH8Q5T0T0 291 aa21.55■■□□□ 1.04
CCDC43-205ENST00000592333 RAB11FIP4Q86YS3 637 aa21.55■■□□□ 1.04
CCDC43-205ENST00000592333 FBXL16Q8N461 479 aa21.55■■□□□ 1.04
CCDC43-205ENST00000592333 KCNB2Q92953 911 aa21.55■■□□□ 1.04
CCDC43-205ENST00000592333 BRPF3Q9ULD4 1205 aa21.55■■□□□ 1.04
CCDC43-205ENST00000592333 V9GY48 417 aaPredicted RBP21.55■■□□□ 1.04
CCDC43-205ENST00000592333 SMCO2A6NFE2 343 aa21.54■■□□□ 1.04
CCDC43-205ENST00000592333 H3BNC9 293 aa21.54■■□□□ 1.04
CCDC43-205ENST00000592333 SREBF1P36956 1147 aa21.54■■□□□ 1.04
CCDC43-205ENST00000592333 CLK2P49760 499 aaKnown RBP21.54■■□□□ 1.04
CCDC43-205ENST00000592333 KCNQ1P51787 676 aa21.54■■□□□ 1.04
CCDC43-205ENST00000592333 IER5Q5VY09 327 aa21.54■■□□□ 1.04
CCDC43-205ENST00000592333 RASEFQ8IZ41 740 aa21.54■■□□□ 1.04
CCDC43-205ENST00000592333 MRPL38Q96DV4 380 aaKnown RBP21.54■■□□□ 1.04
CCDC43-205ENST00000592333 MTUS1Q9ULD2 1270 aa21.54■■□□□ 1.04
CCDC43-205ENST00000592333 RWDD3Q9Y3V2 267 aa21.54■■□□□ 1.04
CCDC43-205ENST00000592333 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.53■■□□□ 1.04
CCDC43-205ENST00000592333 GOLGA8AA7E2F4 631 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 GOLGA8BA8MQT2 603 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 STXBP3O00186 592 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 MEIS1O00470 390 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 ATG7O95352 703 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 ADCK5Q3MIX3 580 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 EPC2Q52LR7 807 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 TYW1BQ6NUM6 668 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 NME8Q8N427 588 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 C17orf80Q9BSJ5 609 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 ANO3Q9BYT9 981 aa21.53■■□□□ 1.04
CCDC43-205ENST00000592333 KLF18A0A0U1RQI7 1052 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 ESYT2A0FGR8 921 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 RB1P06400 928 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 INSRRP14616 1297 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 STAT5BP51692 787 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 FBXO47Q5MNV8 452 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 RUFY4Q6ZNE9 571 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 TSHZ1Q6ZSZ6 1077 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 CCDC12Q8WUD4 166 aaPredicted RBP21.52■■□□□ 1.04
CCDC43-205ENST00000592333 IL17RAQ96F46 866 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 PCYT2Q99447 389 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 FTHL17Q9BXU8 183 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 OSBPL7Q9BZF2 842 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 FAM217BQ9NTX9 383 aaPredicted RBP21.52■■□□□ 1.04
CCDC43-205ENST00000592333 RNF216Q9NWF9 866 aaPredicted RBP21.52■■□□□ 1.04
CCDC43-205ENST00000592333 PCDHA2Q9Y5H9 948 aa21.52■■□□□ 1.04
CCDC43-205ENST00000592333 NID2Q14112 1375 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 IGKV6D-21A0A0A0MT36 114 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 C5orf67F2Z3F1 127 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 CYP3A4P08684 503 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 MARK3P27448 753 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 ACTR2P61160 394 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 LPIN1Q14693 890 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 PFKFB3Q16875 520 aaPredicted RBP21.51■■□□□ 1.03
CCDC43-205ENST00000592333 TIGD5Q53EQ6 642 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 TMEM192Q8IY95 271 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 DNAJB3Q8WWF6 145 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 C1QTNF1Q9BXJ1 281 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 AGO4Q9HCK5 861 aaKnown RBP21.51■■□□□ 1.03
CCDC43-205ENST00000592333 PKD2L1Q9P0L9 805 aa21.51■■□□□ 1.03
CCDC43-205ENST00000592333 M0QZ92 97 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 ENPP3O14638 875 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 UPP2O95045 317 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 GHRP10912 638 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 MRPS6P82932 125 aaKnown RBP21.5■■□□□ 1.03
CCDC43-205ENST00000592333 FGD1P98174 961 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 FIBCD1Q8N539 461 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 CYP2W1Q8TAV3 490 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 TCEANC2Q96MN5 208 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 ZMYND12Q9H0C1 365 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 KDM3AQ9Y4C1 1321 aa21.5■■□□□ 1.03
CCDC43-205ENST00000592333 SMIM35A0A1B0GVV1 85 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 EPB41L2O43491 1005 aaKnown RBP21.49■■□□□ 1.03
CCDC43-205ENST00000592333 NCK2O43639 380 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 ARP10275 920 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 CDC27P30260 824 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 HSPA4P34932 840 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 METAP2P50579 478 aaKnown RBP eCLIP21.49■■□□□ 1.03
CCDC43-205ENST00000592333 PLCB4Q15147 1175 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 PUS10Q3MIT2 529 aaKnown RBP21.49■■□□□ 1.03
CCDC43-205ENST00000592333 LEXMQ3ZCV2 418 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 CRYGNQ8WXF5 182 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 LMAN2LQ9H0V9 348 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 UBE2ZQ9H832 354 aaPredicted RBP21.49■■□□□ 1.03
CCDC43-205ENST00000592333 RC3H2Q9HBD1 1191 aaKnown RBP21.49■■□□□ 1.03
CCDC43-205ENST00000592333 TRPC6Q9Y210 931 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 CDY2AQ9Y6F7 541 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 RALGAPA2Q2PPJ7 1873 aa21.49■■□□□ 1.03
CCDC43-205ENST00000592333 POTEB3A0JP26 581 aa21.48■■□□□ 1.03
CCDC43-205ENST00000592333 SCG2P13521 617 aa21.48■■□□□ 1.03
CCDC43-205ENST00000592333 GNA11P29992 359 aa21.48■■□□□ 1.03
CCDC43-205ENST00000592333 ZNF76P36508 570 aa21.48■■□□□ 1.03
CCDC43-205ENST00000592333 ITGB3BPQ13352 177 aaPredicted RBP21.48■■□□□ 1.03
CCDC43-205ENST00000592333 GPM6BQ13491 265 aa21.48■■□□□ 1.03
CCDC43-205ENST00000592333 FAM160B1Q5W0V3 765 aa21.48■■□□□ 1.03
CCDC43-205ENST00000592333 POTEBQ6S5H4 581 aa21.48■■□□□ 1.03
CCDC43-205ENST00000592333 CLP1Q92989 425 aaKnown RBP21.48■■□□□ 1.03
CCDC43-205ENST00000592333 ZNF689Q96CS4 500 aaPredicted RBP21.48■■□□□ 1.03
CCDC43-205ENST00000592333 AGXT2Q9BYV1 514 aa21.48■■□□□ 1.03
CCDC43-205ENST00000592333 C6orf50Q9HD87 102 aa21.48■■□□□ 1.03
CCDC43-205ENST00000592333 COL1A2P08123 1366 aa21.48■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms