RNA–Protein interactions for RNA: ENST00000590696.1

DDX39A-215, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 563 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-215ENST00000590696 ADCK5Q3MIX3 580 aa24.88■■□□□ 1.57
DDX39A-215ENST00000590696 PPP1R18Q6NYC8 613 aa24.88■■□□□ 1.57
DDX39A-215ENST00000590696 RASEFQ8IZ41 740 aa24.88■■□□□ 1.57
DDX39A-215ENST00000590696 IL17RAQ96F46 866 aa24.88■■□□□ 1.57
DDX39A-215ENST00000590696 CDY2AQ9Y6F7 541 aa24.88■■□□□ 1.57
DDX39A-215ENST00000590696 COL4A6Q14031 1691 aa24.88■■□□□ 1.57
DDX39A-215ENST00000590696 RRN3P2A6NIE6 340 aa24.87■■□□□ 1.57
DDX39A-215ENST00000590696 FOSP01100 380 aaPredicted RBP24.87■■□□□ 1.57
DDX39A-215ENST00000590696 ADCY7P51828 1080 aa24.87■■□□□ 1.57
DDX39A-215ENST00000590696 TSGA10IPQ3SY00 556 aa24.87■■□□□ 1.57
DDX39A-215ENST00000590696 FBXO47Q5MNV8 452 aa24.87■■□□□ 1.57
DDX39A-215ENST00000590696 ZBTB10Q96DT7 871 aa24.87■■□□□ 1.57
DDX39A-215ENST00000590696 SDF4Q9BRK5 362 aa24.87■■□□□ 1.57
DDX39A-215ENST00000590696 C1QTNF1Q9BXJ1 281 aa24.87■■□□□ 1.57
DDX39A-215ENST00000590696 AZI2Q9H6S1 392 aa24.87■■□□□ 1.57
DDX39A-215ENST00000590696 RAPGEFL1Q9UHV5 662 aa24.87■■□□□ 1.57
DDX39A-215ENST00000590696 SMCO2A6NFE2 343 aa24.86■■□□□ 1.57
DDX39A-215ENST00000590696 ENPP3O14638 875 aa24.86■■□□□ 1.57
DDX39A-215ENST00000590696 ARP10275 920 aa24.86■■□□□ 1.57
DDX39A-215ENST00000590696 CENPQQ7L2Z9 268 aaPredicted RBP24.86■■□□□ 1.57
DDX39A-215ENST00000590696 FIBCD1Q8N539 461 aa24.86■■□□□ 1.57
DDX39A-215ENST00000590696 ANO3Q9BYT9 981 aa24.86■■□□□ 1.57
DDX39A-215ENST00000590696 NFASCO94856 1347 aa24.86■■□□□ 1.57
DDX39A-215ENST00000590696 KLF18A0A0U1RQI7 1052 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 GOLGA8AA7E2F4 631 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 GOLGA8BA8MQT2 603 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 STXBP3O00186 592 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 KCNA5P22460 613 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 ACTR2P61160 394 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 MRPS6P82932 125 aaKnown RBP24.85■■□□□ 1.57
DDX39A-215ENST00000590696 LEXMQ3ZCV2 418 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 CEP55Q53EZ4 464 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 TSHZ1Q6ZSZ6 1077 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 TEX2Q8IWB9 1127 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 TNPO1Q92973 898 aaKnown RBP24.85■■□□□ 1.57
DDX39A-215ENST00000590696 FAM49AQ9H0Q0 323 aaPredicted RBP24.85■■□□□ 1.57
DDX39A-215ENST00000590696 TMEM260Q9NX78 707 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 BARHL2Q9NY43 387 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 TRPC6Q9Y210 931 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 NLRC5Q86WI3 1866 aa24.85■■□□□ 1.57
DDX39A-215ENST00000590696 hCG_1984214I3L0E3 225 aa24.84■■□□□ 1.57
DDX39A-215ENST00000590696 CDC27P30260 824 aa24.84■■□□□ 1.57
DDX39A-215ENST00000590696 STAT5BP51692 787 aa24.84■■□□□ 1.57
DDX39A-215ENST00000590696 PLCB4Q15147 1175 aa24.84■■□□□ 1.57
DDX39A-215ENST00000590696 TIGD5Q53EQ6 642 aa24.84■■□□□ 1.57
DDX39A-215ENST00000590696 ZNF713Q8N859 430 aaPredicted RBP24.84■■□□□ 1.57
DDX39A-215ENST00000590696 BANK1Q8NDB2 785 aa24.84■■□□□ 1.57
DDX39A-215ENST00000590696 GADD45GIP1Q8TAE8 222 aaPredicted RBP24.84■■□□□ 1.57
DDX39A-215ENST00000590696 EPHX3Q9H6B9 360 aa24.84■■□□□ 1.57
DDX39A-215ENST00000590696 AGO4Q9HCK5 861 aaKnown RBP24.84■■□□□ 1.57
DDX39A-215ENST00000590696 FAM217BQ9NTX9 383 aaPredicted RBP24.84■■□□□ 1.57
DDX39A-215ENST00000590696 RPLP2P05387 115 aaKnown RBP24.83■■□□□ 1.57
DDX39A-215ENST00000590696 ITGB3BPQ13352 177 aaPredicted RBP24.83■■□□□ 1.57
DDX39A-215ENST00000590696 KRT32Q14532 448 aa24.83■■□□□ 1.57
DDX39A-215ENST00000590696 IER5Q5VY09 327 aa24.83■■□□□ 1.57
DDX39A-215ENST00000590696 PLPPR4Q7Z2D5 763 aa24.83■■□□□ 1.57
DDX39A-215ENST00000590696 TRAPPC12Q8WVT3 735 aa24.83■■□□□ 1.57
DDX39A-215ENST00000590696 AGO3Q9H9G7 860 aaKnown RBP24.83■■□□□ 1.57
DDX39A-215ENST00000590696 NAP1L2Q9ULW6 460 aaPredicted RBP24.83■■□□□ 1.57
DDX39A-215ENST00000590696 RALGAPA2Q2PPJ7 1873 aa24.83■■□□□ 1.56
DDX39A-215ENST00000590696 MEIS1O00470 390 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 CDC45O75419 566 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 CD52P31358 61 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 CTNNB1P35222 781 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 ZNF76P36508 570 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 SREBF1P36956 1147 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 CLK2P49760 499 aaKnown RBP24.82■■□□□ 1.56
DDX39A-215ENST00000590696 AP3B2Q13367 1082 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 TCEAL5Q5H9L2 206 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 GLT8D2Q9H1C3 349 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 RC3H2Q9HBD1 1191 aaKnown RBP24.82■■□□□ 1.56
DDX39A-215ENST00000590696 PCDHA2Q9Y5H9 948 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 ADGRA3Q8IWK6 1321 aa24.82■■□□□ 1.56
DDX39A-215ENST00000590696 M0QZ92 97 aa24.81■■□□□ 1.56
DDX39A-215ENST00000590696 ATG7O95352 703 aa24.81■■□□□ 1.56
DDX39A-215ENST00000590696 BMPR1AP36894 532 aa24.81■■□□□ 1.56
DDX39A-215ENST00000590696 TMEM62Q0P6H9 643 aa24.81■■□□□ 1.56
DDX39A-215ENST00000590696 KHSRPQ92945 711 aaKnown RBP eCLIP24.81■■□□□ 1.56
DDX39A-215ENST00000590696 ZNF689Q96CS4 500 aaPredicted RBP24.81■■□□□ 1.56
DDX39A-215ENST00000590696 NSUN3Q9H649 340 aaKnown RBP24.81■■□□□ 1.56
DDX39A-215ENST00000590696 CD320Q9NPF0 282 aa24.81■■□□□ 1.56
DDX39A-215ENST00000590696 TRPV2Q9Y5S1 764 aa24.81■■□□□ 1.56
DDX39A-215ENST00000590696 SQORQ9Y6N5 450 aa24.81■■□□□ 1.56
DDX39A-215ENST00000590696 BRWD1Q9NSI6 2320 aa24.81■■□□□ 1.56
DDX39A-215ENST00000590696 POTEB3A0JP26 581 aa24.8■■□□□ 1.56
DDX39A-215ENST00000590696 C5orf67F2Z3F1 127 aa24.8■■□□□ 1.56
DDX39A-215ENST00000590696 DDX39AO00148 427 aaKnown RBP24.8■■□□□ 1.56
DDX39A-215ENST00000590696 RB1P06400 928 aa24.8■■□□□ 1.56
DDX39A-215ENST00000590696 HMGB1P09429 215 aaKnown RBP24.8■■□□□ 1.56
DDX39A-215ENST00000590696 LINC00271P0C7V0 271 aa24.8■■□□□ 1.56
DDX39A-215ENST00000590696 ADD1P35611 737 aaKnown RBP24.8■■□□□ 1.56
DDX39A-215ENST00000590696 RCAN1P53805 252 aa24.8■■□□□ 1.56
DDX39A-215ENST00000590696 JAKMIP3Q5VZ66 844 aa24.8■■□□□ 1.56
DDX39A-215ENST00000590696 PTCRAQ6ISU1 281 aaPredicted RBP24.8■■□□□ 1.56
DDX39A-215ENST00000590696 POTEBQ6S5H4 581 aa24.8■■□□□ 1.56
DDX39A-215ENST00000590696 LINC01599Q8WXQ3 324 aa24.8■■□□□ 1.56
DDX39A-215ENST00000590696 RWDD3Q9Y3V2 267 aa24.8■■□□□ 1.56
DDX39A-215ENST00000590696 CPA1P15085 419 aa24.79■■□□□ 1.56
DDX39A-215ENST00000590696 IL9P15248 144 aa24.79■■□□□ 1.56
DDX39A-215ENST00000590696 FGD1P98174 961 aa24.79■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms