RNA–Protein interactions for RNA: ENST00000590407.1

PDE4A-207, Transcript of phosphodiesterase 4A, humanhuman

TSL 1 (best)

Gene PDE4A, Length 1,770 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-207ENST00000590407 KIAA1024Q9UPX6 916 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 LRRC37AA6NMS7 1700 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 LTBP1Q14766 1721 aa13.58□□□□□ -0.24
PDE4A-207ENST00000590407 CCDC188H7C350 402 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 PDXKO00764 312 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 SLC16A3O15427 465 aaKnown RBP13.57□□□□□ -0.24
PDE4A-207ENST00000590407 RAD51CO43502 376 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 MARCH6O60337 910 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 AFPP02771 609 aaKnown RBP13.57□□□□□ -0.24
PDE4A-207ENST00000590407 HOXA10P31260 410 aaPredicted RBP13.57□□□□□ -0.24
PDE4A-207ENST00000590407 RFC4P35249 363 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 EPS15P42566 896 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 ICE2Q659A1 982 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 DPP8Q6V1X1 898 aaPredicted RBP13.57□□□□□ -0.24
PDE4A-207ENST00000590407 TMC4Q7Z404 712 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 ARFGAP2Q8N6H7 521 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 RBM17Q96I25 401 aaKnown RBP13.57□□□□□ -0.24
PDE4A-207ENST00000590407 EPN3Q9H201 632 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 ADAMTS1Q9UHI8 967 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 HDAC9Q9UKV0 1011 aa13.57□□□□□ -0.24
PDE4A-207ENST00000590407 E9PMD0 336 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 ERLIN2O94905 339 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 UCHL3P15374 230 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 NR1D1P20393 614 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 NFIL3Q16649 462 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 ARSHQ5FYA8 562 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 TRAPPC3LQ5T215 181 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 PRR5LQ6MZQ0 368 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 MICALCLQ6ZW33 695 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 TEX2Q8IWB9 1127 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 RASGEF1CQ8N431 466 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 FAM133AQ8N9E0 248 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 LMBR1Q8WVP7 490 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 LRRC45Q96CN5 670 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 ZFP91Q96JP5 570 aaPredicted RBP13.56□□□□□ -0.24
PDE4A-207ENST00000590407 CCDC17Q96LX7 622 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 GPR101Q96P66 508 aaPredicted RBP13.56□□□□□ -0.24
PDE4A-207ENST00000590407 EHD4Q9H223 541 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 SUCLA2Q9P2R7 463 aaPredicted RBP13.56□□□□□ -0.24
PDE4A-207ENST00000590407 ARMCX3Q9UH62 379 aaPredicted RBP13.56□□□□□ -0.24
PDE4A-207ENST00000590407 SERPINB13Q9UIV8 391 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 NAGPAQ9UK23 515 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 DAAM1Q9Y4D1 1078 aa13.56□□□□□ -0.24
PDE4A-207ENST00000590407 POTEB3A0JP26 581 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 POTECB2RU33 542 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 NDUFAB1O14561 156 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 CALUO43852 315 aaPredicted RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 FLOT1O75955 427 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 KRT14P02533 472 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 NR2F2P24468 414 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 LSP1P33241 339 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 SHMT1P34896 483 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 JAM2P57087 298 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 MRPS25P82663 173 aaKnown RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 PTK2Q05397 1052 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 SPIRE1Q08AE8 756 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 KNOP1Q1ED39 458 aaKnown RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 Q4G0T1 1027 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 SPDYCQ5MJ68 293 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 POTEBQ6S5H4 581 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 MMS22LQ6ZRQ5 1243 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 ZNF571Q7Z3V5 609 aaPredicted RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 AMIGO3Q86WK7 504 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 NELFCDQ8IXH7 590 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 SYT2Q8N9I0 419 aaPredicted RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 ERMNQ8TAM6 284 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 TBC1D16Q8TBP0 767 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 SEC14L1Q92503 715 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 HINFPQ9BQA5 517 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 PACSIN1Q9BY11 444 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 SLITRK6Q9H5Y7 841 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 TMBIM4Q9HC24 238 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 TTC7AQ9ULT0 858 aaPredicted RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 STXBP5LQ9Y2K9 1186 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 PGRMC1O00264 195 aaKnown RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 PPP1R37O75864 691 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 SSBP05455 408 aaKnown RBP eCLIP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 RPL13P26373 211 aaKnown RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 PON1P27169 355 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 RPA1P27694 616 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 ECHS1P30084 290 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 ITGB3BPQ13352 177 aaPredicted RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 PDCLQ13371 301 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 BIRC3Q13489 604 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 MTMR3Q13615 1198 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 GIT2Q14161 759 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 EPHA7Q15375 998 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 PTGISQ16647 500 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 EXOC3L4Q17RC7 722 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 FAM98CQ17RN3 349 aaKnown RBP13.55□□□□□ -0.24
PDE4A-207ENST00000590407 SLC51AQ86UW1 340 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 VPS36Q86VN1 386 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 SYCE1Q8N0S2 351 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 TPCN2Q8NHX9 752 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 ETNPPLQ8TBG4 499 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 DCAF4Q8WV16 495 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 IFT81Q8WYA0 676 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 MKL1Q969V6 931 aa13.55□□□□□ -0.24
PDE4A-207ENST00000590407 RNPC3Q96LT9 517 aaKnown RBP13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms