RNA–Protein interactions for RNA: ENST00000588656.1

CHUK-203, Transcript of conserved helix-loop-helix ubiquitous kinase, humanhuman

TSL 3

Gene CHUK, Length 675 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHUK-203ENST00000588656 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.64□□□□□ -1.35
CHUK-203ENST00000588656 WNT8AQ9H1J5 351 aa6.64□□□□□ -1.35
CHUK-203ENST00000588656 HIPK3Q9H422 1215 aa6.64□□□□□ -1.35
CHUK-203ENST00000588656 GRIN2DO15399 1336 aa6.64□□□□□ -1.35
CHUK-203ENST00000588656 TMEM232C9JQI7 657 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 DYNC1LI2O43237 492 aaPredicted RBP6.63□□□□□ -1.35
CHUK-203ENST00000588656 ZBED4O75132 1171 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 DUSP11O75319 330 aaKnown RBP6.63□□□□□ -1.35
CHUK-203ENST00000588656 ATP5JP18859 108 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 CDK7P50613 346 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 ATP1A2P50993 1020 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 TNFAIP2Q03169 654 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 TTLL4Q14679 1199 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 HSP90AB4PQ58FF6 505 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 MICAL3Q7RTP6 2002 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 LOXHD1Q8IVV2 1947 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 TMEM199Q8N511 208 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 PPIL4Q8WUA2 492 aaKnown RBP eCLIP6.63□□□□□ -1.35
CHUK-203ENST00000588656 SYNGAP1Q96PV0 1343 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 ASB2Q96Q27 587 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 STRBPQ96SI9 672 aaKnown RBP6.63□□□□□ -1.35
CHUK-203ENST00000588656 KATNBL1Q9H079 304 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 SLC28A3Q9HAS3 691 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 IL23AQ9NPF7 189 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 A1CFQ9NQ94 594 aaKnown RBP6.63□□□□□ -1.35
CHUK-203ENST00000588656 RNF146Q9NTX7 359 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 TRMT13Q9NUP7 481 aaKnown RBP6.63□□□□□ -1.35
CHUK-203ENST00000588656 ARPP21Q9UBL0 812 aaPredicted RBP6.63□□□□□ -1.35
CHUK-203ENST00000588656 MSRAQ9UJ68 235 aa6.63□□□□□ -1.35
CHUK-203ENST00000588656 DIS3Q9Y2L1 958 aaKnown RBP6.63□□□□□ -1.35
CHUK-203ENST00000588656 ZNF536O15090 1300 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 FRMPD2Q68DX3 1309 aaPredicted RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 FAM86C2PA6NEL3 165 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 TLR3O15455 904 aaKnown RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 GPAA1O43292 621 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 CD4P01730 458 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 FGBP02675 491 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 NEFLP07196 543 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 CA3P07451 260 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 MYL3P08590 195 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 MCCP23508 829 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 CST5P28325 142 aaPredicted RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 SLC16A2P36021 539 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 GJA9P57773 515 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 ITGA7Q13683 1181 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 DOC2BQ14184 412 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 UBE3CQ15386 1083 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 FAM47CQ5HY64 1035 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 RASIP1Q5U651 963 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 SLFN13Q68D06 897 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 PSRC1Q6PGN9 363 aaPredicted RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 MAMDC4Q6UXC1 1216 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 NSMFQ6X4W1 530 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 ZNF444Q8N0Y2 327 aaPredicted RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 PRPF38AQ8NAV1 312 aaKnown RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 PCSK9Q8NBP7 692 aaKnown RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 OTUD7AQ8TE49 926 aaPredicted RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 COPS5Q92905 334 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 TNFRSF25Q93038 417 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 TOX2Q96NM4 488 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 MDFIQ99750 246 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 UPF3AQ9H1J1 476 aaKnown RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 ABHD16BQ9H3Z7 469 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 SPC25Q9HBM1 224 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 SLC38A10Q9HBR0 1119 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 NRBP1Q9UHY1 535 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 MYO7AQ13402 2215 aa6.62□□□□□ -1.35
CHUK-203ENST00000588656 BAZ2BQ9UIF8 2168 aaKnown RBP6.62□□□□□ -1.35
CHUK-203ENST00000588656 C5orf42Q9H799 3197 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 KAT6AQ92794 2004 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 ELP1O95163 1332 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 MROH7Q68CQ1 1323 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 IGKV6D-41A0A0C4DH26 115 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 SORBS3O60504 671 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 IGSF3O75054 1194 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 RAB11FIP3O75154 756 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 HMMRO75330 724 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 TSPY3P0CV98 308 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 TSPY8P0CW00 308 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 BMP3P12645 472 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 COPB2P35606 906 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 PSMA6P60900 246 aaKnown RBP6.61□□□□□ -1.35
CHUK-203ENST00000588656 MRPS5P82675 430 aaKnown RBP6.61□□□□□ -1.35
CHUK-203ENST00000588656 TFAP4Q01664 338 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 SFSWAPQ12872 951 aaKnown RBP6.61□□□□□ -1.35
CHUK-203ENST00000588656 FSCN1Q16658 493 aaKnown RBP6.61□□□□□ -1.35
CHUK-203ENST00000588656 CCDC96Q2M329 555 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 TTBK2Q6IQ55 1244 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 SLC30A10Q6XR72 485 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 KIAA1211Q6ZU35 1233 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 DEPDC4Q8N2C3 294 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 ARNTL2Q8WYA1 636 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 HERVK_113Q902F9 699 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 VWCEQ96DN2 955 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 NOC4LQ9BVI4 516 aaKnown RBP6.61□□□□□ -1.35
CHUK-203ENST00000588656 LRRCC1Q9C099 1032 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 ACAD9Q9H845 621 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 ZBTB40Q9NUA8 1239 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 MTMR4Q9NYA4 1195 aa6.61□□□□□ -1.35
CHUK-203ENST00000588656 NYAP2Q9P242 653 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms