RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 DYDC2Q96IM9 177 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 PAWRQ96IZ0 340 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 EIF2AK1Q9BQI3 630 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 MTG1Q9BT17 334 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 SENP6Q9GZR1 1112 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 GDPD2Q9HCC8 539 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 ZNF302Q9NR11 478 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 RGL1Q9NZL6 768 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 WRAP73Q9P2S5 460 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 LRWD1Q9UFC0 647 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 RCOR1Q9UKL0 485 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 CFAP45Q9UL16 551 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 SRPRBQ9Y5M8 271 aaKnown RBP12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 MORC2Q9Y6X9 1032 aaPredicted RBP12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 GRIN2DO15399 1336 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 EMSYQ7Z589 1322 aa12.04□□□□□ -0.48
SMARCA4-213ENST00000587988 SCN10AQ9Y5Y9 1956 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 H3BRB1 525 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 HAS3O00219 553 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 ZNF862O60290 1169 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 PPP6R2O75170 966 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 MED24O75448 989 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 SLITRK3O94933 977 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 F2P00734 622 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 P4HBP07237 508 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 CAPN2P17655 700 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 MARK3P27448 753 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 PSEN2P49810 448 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 CHMP4BP1P59074 171 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 CYP4A11Q02928 519 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 CTTNQ14247 550 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 PDIA5Q14554 519 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 MFSD10Q14728 455 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 KIAA0753Q2KHM9 967 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 NBPF20Q3BBV1 942 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 PDXDC2PQ6P474 469 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 TRMT1LQ7Z2T5 733 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 UBE2Q1Q7Z7E8 422 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 AFAP1L1Q8TED9 768 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 LEO1Q8WVC0 666 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 GLG1Q92896 1179 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 VTI1AQ96AJ9 217 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 HSD17B14Q9BPX1 270 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 MMTAG2Q9BU76 263 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 CSRNP2Q9H175 543 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 RNPEPQ9H4A4 650 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 SMARCAD1Q9H4L7 1026 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 TUT1Q9H6E5 874 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 AZI2Q9H6S1 392 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 MAFBQ9Y5Q3 323 aaPredicted RBP12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 IGSF9BQ9UPX0 1349 aa12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 MYH9P35579 1960 aaKnown RBP12.03□□□□□ -0.48
SMARCA4-213ENST00000587988 A0A087WWV3 80 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 ZBTB39O15060 712 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 CABYRO75952 493 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 STBD1O95210 358 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 SPATA31C1P0DKV0 1188 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 LONP1P36776 959 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 PLCB4Q15147 1175 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 ECM1Q16610 540 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 FAM160B1Q5W0V3 765 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 USP49Q70CQ1 688 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 PLPPR4Q7Z2D5 763 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 CATSPER3Q86XQ3 398 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 KRI1Q8N9T8 703 aaKnown RBP12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 SPATA32Q96LK8 384 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 GLT1D1Q96MS3 346 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 C11orf49Q9H6J7 331 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 STARD7Q9NQZ5 370 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 ERAP1Q9NZ08 941 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 PCDHA7Q9UN72 937 aa12.02□□□□□ -0.49
SMARCA4-213ENST00000587988 TMEM150BA6NC51 233 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 QARSP47897 775 aaKnown RBP12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 ATN1P54259 1190 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 PSMC5P62195 406 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 PRKCEQ02156 737 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 ITGA7Q13683 1181 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 HIC1Q14526 733 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 AXDND1Q5T1B0 1012 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 SLC39A5Q6ZMH5 540 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 NECAB2Q7Z6G3 386 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 TPH2Q8IWU9 490 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 KCNG4Q8TDN1 519 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 EPSTI1Q96J88 318 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 LXNQ9BS40 222 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 POLR3CQ9BUI4 534 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 KATNAL1Q9BW62 490 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 RAB34Q9BZG1 259 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 SCAND2PQ9GZW5 306 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 HDAC6Q9UBN7 1215 aa12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 ZNF215Q9UL58 517 aaPredicted RBP12.01□□□□□ -0.49
SMARCA4-213ENST00000587988 A0A0U1RQG5 324 aaPredicted RBP12□□□□□ -0.49
SMARCA4-213ENST00000587988 POTEB3A0JP26 581 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 SMIM10L2AP0DMW4 78 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 SMIM10L2BP0DMW5 78 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 RPA1P27694 616 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 CCT6AP40227 531 aaKnown RBP12□□□□□ -0.49
SMARCA4-213ENST00000587988 ME1P48163 572 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 KRT79Q5XKE5 535 aa12□□□□□ -0.49
SMARCA4-213ENST00000587988 POTEBQ6S5H4 581 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms