RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 DBF4BQ8NFT6 615 aa20.11■□□□□ 0.81
TPM4-206ENST00000587201 TNPO1Q92973 898 aaKnown RBP20.11■□□□□ 0.81
TPM4-206ENST00000587201 TRPC6Q9Y210 931 aa20.11■□□□□ 0.81
TPM4-206ENST00000587201 IPO5O00410 1097 aaKnown RBP20.1■□□□□ 0.81
TPM4-206ENST00000587201 CDKL5O76039 1030 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 ATG7O95352 703 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 CA3P07451 260 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 DEFB103AP81534 67 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 ANKRD1Q15327 319 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 PRR16Q569H4 304 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 TAF2Q6P1X5 1199 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 RUFY4Q6ZNE9 571 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 PLPPR4Q7Z2D5 763 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 TUBE1Q9UJT0 475 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 TPCN1Q9ULQ1 816 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 PCDHA4Q9UN74 947 aa20.1■□□□□ 0.81
TPM4-206ENST00000587201 RRN3P2A6NIE6 340 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 BACH1O14867 736 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 DHX15O43143 795 aaKnown RBP20.09■□□□□ 0.81
TPM4-206ENST00000587201 TLL1O43897 1013 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 CCNE2O96020 404 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 INSRRP14616 1297 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 CIITAP33076 1130 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 AK2P54819 239 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 PLCB4Q15147 1175 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 TMCO2Q7Z6W1 182 aaPredicted RBP20.09■□□□□ 0.81
TPM4-206ENST00000587201 RSPH3Q86UC2 560 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 AIFM3Q96NN9 605 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 ZBED2Q9BTP6 218 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 TBC1D22BQ9NU19 505 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 TCEAL9Q9UHQ7 104 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 KAT6AQ92794 2004 aa20.09■□□□□ 0.81
TPM4-206ENST00000587201 MBLAC1A4D2B0 266 aaPredicted RBP20.08■□□□□ 0.81
TPM4-206ENST00000587201 PFKFB2O60825 505 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 PLEKHG4Q58EX7 1191 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 FAM26DQ5JW98 314 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 MARCH8Q5T0T0 291 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 FAM160B1Q5W0V3 765 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 MIS18BP1Q6P0N0 1132 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 ABHD15Q6UXT9 468 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 BLIDQ8IZY5 108 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 SEPT8Q92599 483 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 C22orf23Q9BZE7 217 aa20.08■□□□□ 0.81
TPM4-206ENST00000587201 IGKV6D-21A0A0A0MT36 114 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 POTEB3A0JP26 581 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 SLC26A2P50443 739 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 USP11P51784 963 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 POTEBQ6S5H4 581 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 RPAINQ86UA6 219 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 TBCKQ8TEA7 893 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 DNAJB3Q8WWF6 145 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 OSBPL7Q9BZF2 842 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 ZNF302Q9NR11 478 aa20.07■□□□□ 0.8
TPM4-206ENST00000587201 SEC24BO95487 1268 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 CHRNA1P02708 482 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 AMHP03971 560 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 IGFBP4P22692 258 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 GALNT17Q6IS24 598 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 ZNF746Q6NUN9 644 aaPredicted RBP20.06■□□□□ 0.8
TPM4-206ENST00000587201 SWSAP1Q6NVH7 229 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 FAM117BQ6P1L5 589 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 PDXDC2PQ6P474 469 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.06■□□□□ 0.86e-8■□□□□ 9.1
TPM4-206ENST00000587201 CCDC60Q8IWA6 550 aaPredicted RBP20.06■□□□□ 0.8
TPM4-206ENST00000587201 FAM177A1Q8N128 213 aaPredicted RBP20.06■□□□□ 0.8
TPM4-206ENST00000587201 DAGLBQ8NCG7 672 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 ZBTB10Q96DT7 871 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 IL17RAQ96F46 866 aa20.06■□□□□ 0.8
TPM4-206ENST00000587201 EDIL3O43854 480 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 GJB5O95377 273 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 XBP1P17861 261 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 KRT76Q01546 638 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 MGAT3Q09327 533 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 ADGRE1Q14246 886 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.05■□□□□ 0.82e-6■■■■■ 40.6
TPM4-206ENST00000587201 SMAP1Q8IYB5 467 aaPredicted RBP20.05■□□□□ 0.8
TPM4-206ENST00000587201 MYOCDQ8IZQ8 938 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 TRAPPC12Q8WVT3 735 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 APBB2Q92870 758 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 LENG9Q96B70 501 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 FAM49AQ9H0Q0 323 aaPredicted RBP20.05■□□□□ 0.8
TPM4-206ENST00000587201 CERS4Q9HA82 394 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 KCNJ14Q9UNX9 436 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 SAMM50Q9Y512 469 aa20.05■□□□□ 0.8
TPM4-206ENST00000587201 STK36Q9NRP7 1315 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 M0R2N6 131 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 MSH4O15457 936 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 HBP1O60381 514 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 DTNBO60941 627 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 ARHGEF15O94989 841 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 RPLP2P05387 115 aaKnown RBP20.04■□□□□ 0.8
TPM4-206ENST00000587201 PSAPP07602 524 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 GHRP10912 638 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 NEK4P51957 841 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 TAP1Q03518 808 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 CKAP2LQ8IYA6 745 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 PPM1EQ8WY54 764 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 RAD9AQ99638 391 aa20.04■□□□□ 0.8
TPM4-206ENST00000587201 IFIH1Q9BYX4 1025 aaKnown RBP20.04■□□□□ 0.8
TPM4-206ENST00000587201 PCDHA10Q9Y5I2 948 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms