RNA–Protein interactions for RNA: ENST00000585449.1

SAFB2-202, Transcript of scaffold attachment factor B2, humanhuman

TSL 5

Gene SAFB2, Length 443 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAFB2-202ENST00000585449 CXCL10P02778 98 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 CTSHP09668 335 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 INSRRP14616 1297 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 ATP2A2P16615 1042 aaKnown RBP12.1□□□□□ -0.47
SAFB2-202ENST00000585449 USP11P51784 963 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 GRIN2CQ14957 1233 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 PLCB4Q15147 1175 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 SWSAP1Q6NVH7 229 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 PLPPR4Q7Z2D5 763 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 TMCO2Q7Z6W1 182 aaPredicted RBP12.1□□□□□ -0.47
SAFB2-202ENST00000585449 DAGLBQ8NCG7 672 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 LENG9Q96B70 501 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 PHF20Q9BVI0 1012 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 ZNF576Q9H609 170 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 MSRAQ9UJ68 235 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 STXBP5LQ9Y2K9 1186 aa12.1□□□□□ -0.47
SAFB2-202ENST00000585449 IGKV6D-21A0A0A0MT36 114 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 BACH1O14867 736 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 MSH4O15457 936 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 PARNO95453 639 aaKnown RBP12.09□□□□□ -0.47
SAFB2-202ENST00000585449 TDP2O95551 362 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 ATP4AP20648 1035 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 SETQ01105 290 aaPredicted RBP12.09□□□□□ -0.47
SAFB2-202ENST00000585449 ST3GAL1Q11201 340 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 GALNT17Q6IS24 598 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 CNKSR3Q6P9H4 555 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 TRMT1LQ7Z2T5 733 aaKnown RBP12.09□□□□□ -0.47
SAFB2-202ENST00000585449 CCDC60Q8IWA6 550 aaPredicted RBP12.09□□□□□ -0.47
SAFB2-202ENST00000585449 DBF4BQ8NFT6 615 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 OXER1Q8TDS5 423 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 TRAPPC12Q8WVT3 735 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 DNAJB3Q8WWF6 145 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 MYLIPQ8WY64 445 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 GTF3C6Q969F1 213 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 KIF2CQ99661 725 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 TBC1D22BQ9NU19 505 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 TRPC6Q9Y210 931 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 STK36Q9NRP7 1315 aa12.09□□□□□ -0.47
SAFB2-202ENST00000585449 TMEM265A0A087WTH1 108 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 POTEB3A0JP26 581 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 MBLAC1A4D2B0 266 aaPredicted RBP12.08□□□□□ -0.48
SAFB2-202ENST00000585449 JAK2O60674 1132 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 CHRNA1P02708 482 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 FOSBP53539 338 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 DEFB103AP81534 67 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 NONOQ15233 471 aaKnown RBP eCLIP12.08□□□□□ -0.48
SAFB2-202ENST00000585449 RAB30Q15771 203 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 INF2Q27J81 1249 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 MIS18BP1Q6P0N0 1132 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 POTEBQ6S5H4 581 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 NSUN7Q8NE18 718 aaKnown RBP12.08□□□□□ -0.48
SAFB2-202ENST00000585449 PHOSPHO2Q8TCD6 241 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 C22orf23Q9BZE7 217 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 ZNF302Q9NR11 478 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 TUBE1Q9UJT0 475 aa12.08□□□□□ -0.48
SAFB2-202ENST00000585449 CYP3A7-CYP3A51PA0A087WV96 503 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 RRN3P2A6NIE6 340 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 BAIAP3O94812 1187 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 XBP1P17861 261 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 CYP3A7P24462 503 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 KCNJ6P48051 423 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 WDR5P61964 334 aaKnown RBP12.07□□□□□ -0.48
SAFB2-202ENST00000585449 IKBKEQ14164 716 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 Q4G0T1 1027 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 PLEKHG4Q58EX7 1191 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 EARS2Q5JPH6 523 aaKnown RBP12.07□□□□□ -0.48
SAFB2-202ENST00000585449 FAM26DQ5JW98 314 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 FAM160B1Q5W0V3 765 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 ZNF746Q6NUN9 644 aaPredicted RBP12.07□□□□□ -0.48
SAFB2-202ENST00000585449 TAF2Q6P1X5 1199 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 PDXDC2PQ6P474 469 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.07□□□□□ -0.48
SAFB2-202ENST00000585449 KRT25Q7Z3Z0 450 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 HERC6Q8IVU3 1022 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 FAM177A1Q8N128 213 aaPredicted RBP12.07□□□□□ -0.48
SAFB2-202ENST00000585449 SLC5A5Q92911 643 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 SLC9A7Q96T83 725 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 TANC1Q9C0D5 1861 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 FAM49AQ9H0Q0 323 aaPredicted RBP12.07□□□□□ -0.48
SAFB2-202ENST00000585449 SLC28A3Q9HAS3 691 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 GABBR1Q9UBS5 961 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 LIMCH1Q9UPQ0 1083 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 SAMM50Q9Y512 469 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 PCDHA11Q9Y5I1 949 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 PCDHA10Q9Y5I2 948 aa12.07□□□□□ -0.48
SAFB2-202ENST00000585449 KAT6AQ92794 2004 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 CCDC194A0A1B0GVG4 234 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 ABHD14A-ACY1A0A1B0GW23 586 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 FAM205CA6NFA0 338 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 CHMP2AO43633 222 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 HBP1O60381 514 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 GAS7O60861 476 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 CAND2O75155 1236 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 ARHGEF15O94989 841 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 PSAPP07602 524 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 KLRC1P26715 233 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 KRT76Q01546 638 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 MGAT3Q09327 533 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 TMEM62Q0P6H9 643 aa12.06□□□□□ -0.48
SAFB2-202ENST00000585449 NR5A1Q13285 461 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms