RNA–Protein interactions for RNA: ENST00000584063.5

CDK5RAP3-231, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,759 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-231ENST00000584063 EXOC4Q96A65 974 aa12.75□□□□□ -0.37
CDK5RAP3-231ENST00000584063 JAKMIP2Q96AA8 810 aa12.75□□□□□ -0.37
CDK5RAP3-231ENST00000584063 FAM163AQ96GL9 167 aaPredicted RBP12.75□□□□□ -0.37
CDK5RAP3-231ENST00000584063 ZHX3Q9H4I2 956 aa12.75□□□□□ -0.37
CDK5RAP3-231ENST00000584063 PIF1Q9H611 641 aa12.75□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SLC39A2Q9NP94 309 aa12.75□□□□□ -0.37
CDK5RAP3-231ENST00000584063 RAB21Q9UL25 225 aa12.75□□□□□ -0.37
CDK5RAP3-231ENST00000584063 GAKO14976 1311 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 YDJCA8MPS7 323 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TCP10L2B9ZVM9 353 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 NCK2O43639 380 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 IDEP14735 1019 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 MTIF2P46199 727 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 STK4Q13043 487 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.74□□□□□ -0.371e-6■□□□□ 10.2
CDK5RAP3-231ENST00000584063 DYMQ7RTS9 669 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TMEM110Q86TL2 294 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 POTEDQ86YR6 584 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 RELL1Q8IUW5 271 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 GLIS3Q8NEA6 775 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 C7orf43Q8WVR3 580 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 RRP36Q96EU6 259 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 LRWD1Q9UFC0 647 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 BCS1LQ9Y276 419 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SAR1BQ9Y6B6 198 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 MYH10P35580 1976 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 PRSS47A8MTI9 375 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 EPHB6O15197 1021 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 BMP15O95972 392 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 GGCXP38435 758 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 GSCP56915 257 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 PREPLQ4J6C6 727 aaPredicted RBP12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 C16orf86Q6ZW13 317 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 DGKHQ86XP1 1220 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 RPUSD2Q8IZ73 545 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 ADSSL1Q8N142 457 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 GOLGA6L1Q8N7Z2 621 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TUBGCP2Q9BSJ2 902 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 MMTAG2Q9BU76 263 aaKnown RBP12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 RASSF4Q9H2L5 321 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 VEZTQ9HBM0 779 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 BARHL2Q9NY43 387 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 DLEC1Q9Y238 1755 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SNED1Q8TER0 1413 aa12.74□□□□□ -0.37
CDK5RAP3-231ENST00000584063 CCDC88AQ3V6T2 1871 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 PALM3A6NDB9 673 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SMCO2A6NFE2 343 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 HLA-DOAP06340 250 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 PDE4DQ08499 809 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 ANKRD40Q6AI12 368 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 GOLGA5Q8TBA6 731 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 PRMT6Q96LA8 375 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 DHRS1Q96LJ7 313 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 NHEJ1Q9H9Q4 299 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 GPCPD1Q9NPB8 672 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 DDTLA6NHG4 134 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 RASSF10A6NK89 507 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 LONP1P36776 959 aaKnown RBP12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TXKP42681 527 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 ASIC1P78348 528 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 APBA1Q02410 837 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SEPT2Q15019 361 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 AP1ARQ63HQ0 302 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 NAIF1Q69YI7 327 aaPredicted RBP12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 LRRC31Q6UY01 552 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 DNAAF5Q86Y56 855 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 COG1Q8WTW3 980 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 BICD1Q96G01 975 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 NUDT12Q9BQG2 462 aa12.73□□□□□ -0.37
CDK5RAP3-231ENST00000584063 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 GDF11O95390 407 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 MOCS3O95396 460 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SYF2O95926 243 aaKnown RBP12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TAL1P17542 331 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 VCAM1P19320 739 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 CALML3P27482 149 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TRAPPC10P48553 1259 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 LRRC41Q15345 812 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 WHAMMP3Q1A5X7 153 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TBC1D25Q3MII6 688 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 CABP7Q86V35 215 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 NCAPG2Q86XI2 1143 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TBCKQ8TEA7 893 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 CENPTQ96BT3 561 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 AS3MTQ9HBK9 375 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 CHST12Q9NRB3 414 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 LAMB1P07942 1786 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 PSMD14O00487 310 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 ZNF263O14978 683 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TDP2O95551 362 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 UBE2SQ16763 222 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 TRAPPC11Q7Z392 1133 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SRLQ86TD4 932 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SLC43A3Q8NBI5 491 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 GABPB2Q8TAK5 448 aaPredicted RBP12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 SPC25Q9HBM1 224 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 CAPN6Q9Y6Q1 641 aa12.72□□□□□ -0.37
CDK5RAP3-231ENST00000584063 POTEMA6NI47 508 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 LRRC10BA6NIK2 292 aa12.71□□□□□ -0.37
CDK5RAP3-231ENST00000584063 BUB1O43683 1085 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms