RNA–Protein interactions for RNA: ENST00000583173.5

TSEN54-208, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 5

Gene TSEN54, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-208ENST00000583173 TTC12Q9H892 705 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-208ENST00000583173 ZNF302Q9NR11 478 aa24.39■■□□□ 1.49
TSEN54-208ENST00000583173 PDLIM7Q9NR12 457 aa24.39■■□□□ 1.49
TSEN54-208ENST00000583173 TRMT13Q9NUP7 481 aaKnown RBP24.39■■□□□ 1.49
TSEN54-208ENST00000583173 ZNF215Q9UL58 517 aaPredicted RBP24.39■■□□□ 1.49
TSEN54-208ENST00000583173 TRIM43BA6NCK2 446 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 KIAA0355O15063 1070 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 ZNF862O60290 1169 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 STBD1O95210 358 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 OR52Z1P0C646 297 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 SMIM10L2AP0DMW4 78 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 SMIM10L2BP0DMW5 78 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 TXKP42681 527 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 SLC26A2P50443 739 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 PKP1Q13835 747 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 EPHA7Q15375 998 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 C7orf61Q8IZ16 206 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 C7orf31Q8N865 590 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 TRIM43Q96BQ3 446 aaPredicted RBP24.38■■□□□ 1.49
TSEN54-208ENST00000583173 ZSCAN16Q9H4T2 348 aaPredicted RBP24.38■■□□□ 1.49
TSEN54-208ENST00000583173 TBX21Q9UL17 535 aa24.38■■□□□ 1.49
TSEN54-208ENST00000583173 CHMP2AO43633 222 aa24.37■■□□□ 1.49
TSEN54-208ENST00000583173 ZNF200P98182 395 aaPredicted RBP24.37■■□□□ 1.49
TSEN54-208ENST00000583173 IL17AQ16552 155 aa24.37■■□□□ 1.49
TSEN54-208ENST00000583173 UGCGQ16739 394 aa24.37■■□□□ 1.49
TSEN54-208ENST00000583173 FAM160B1Q5W0V3 765 aa24.37■■□□□ 1.49
TSEN54-208ENST00000583173 GABBR1Q9UBS5 961 aa24.37■■□□□ 1.49
TSEN54-208ENST00000583173 ZDHHC9Q9Y397 364 aa24.37■■□□□ 1.49
TSEN54-208ENST00000583173 NR2E3Q9Y5X4 410 aa24.37■■□□□ 1.49
TSEN54-208ENST00000583173 BACH1O14867 736 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 MARCH6O60337 910 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 CLTBP09497 229 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 ZSCAN22P10073 491 aaPredicted RBP24.36■■□□□ 1.49
TSEN54-208ENST00000583173 MARK3P27448 753 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 CHMP4BP1P59074 171 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 ATP2C1P98194 919 aaPredicted RBP24.36■■□□□ 1.49
TSEN54-208ENST00000583173 PDXDC2PQ6P474 469 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 FAM173BQ6P4H8 233 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 HSD17B14Q9BPX1 270 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 SETD4Q9NVD3 440 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 TCEAL9Q9UHQ7 104 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 SAMM50Q9Y512 469 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 PDE4DIPQ5VU43 2346 aa24.36■■□□□ 1.49
TSEN54-208ENST00000583173 IGSF9BQ9UPX0 1349 aa24.35■■□□□ 1.49
TSEN54-208ENST00000583173 LAD1O00515 517 aa24.35■■□□□ 1.49
TSEN54-208ENST00000583173 TLR3O15455 904 aaKnown RBP24.35■■□□□ 1.49
TSEN54-208ENST00000583173 ITGB8P26012 769 aa24.35■■□□□ 1.49
TSEN54-208ENST00000583173 PRPHP41219 470 aa24.35■■□□□ 1.49
TSEN54-208ENST00000583173 FAM47CQ5HY64 1035 aa24.35■■□□□ 1.49
TSEN54-208ENST00000583173 MARCH8Q5T0T0 291 aa24.35■■□□□ 1.49
TSEN54-208ENST00000583173 ATP8B4Q8TF62 1192 aa24.35■■□□□ 1.49
TSEN54-208ENST00000583173 NRCAMQ92823 1304 aa24.35■■□□□ 1.49
TSEN54-208ENST00000583173 POTEB3A0JP26 581 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 ZBTB42B2RXF5 422 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 HBP1O60381 514 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 SLITRK3O94933 977 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 INSRRP14616 1297 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 DDIT3P35638 169 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 FXR2P51116 673 aaKnown RBP eCLIP24.34■■□□□ 1.49
TSEN54-208ENST00000583173 PDIA5Q14554 519 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 PTGISQ16647 500 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 POTEBQ6S5H4 581 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 TMEM39AQ9NV64 488 aa24.34■■□□□ 1.49
TSEN54-208ENST00000583173 C17orf102A2RUQ5 167 aa24.33■■□□□ 1.49
TSEN54-208ENST00000583173 MBLAC1A4D2B0 266 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-208ENST00000583173 H0YGN5 161 aa24.33■■□□□ 1.49
TSEN54-208ENST00000583173 BRD1O95696 1058 aa24.33■■□□□ 1.49
TSEN54-208ENST00000583173 P4HBP07237 508 aaKnown RBP24.33■■□□□ 1.49
TSEN54-208ENST00000583173 TECP42680 631 aa24.33■■□□□ 1.49
TSEN54-208ENST00000583173 PTPAQ15257 358 aa24.33■■□□□ 1.49
TSEN54-208ENST00000583173 TRIM71Q2Q1W2 868 aaKnown RBP24.33■■□□□ 1.49
TSEN54-208ENST00000583173 LMBR1Q8WVP7 490 aa24.33■■□□□ 1.49
TSEN54-208ENST00000583173 DHX38Q92620 1227 aaKnown RBP24.33■■□□□ 1.49
TSEN54-208ENST00000583173 RGL1Q9NZL6 768 aa24.33■■□□□ 1.49
TSEN54-208ENST00000583173 WRAP73Q9P2S5 460 aaPredicted RBP24.33■■□□□ 1.49
TSEN54-208ENST00000583173 CLIC4Q9Y696 253 aa24.33■■□□□ 1.49
TSEN54-208ENST00000583173 TREHO43280 583 aa24.32■■□□□ 1.48
TSEN54-208ENST00000583173 CYP2C9P11712 490 aa24.32■■□□□ 1.48
TSEN54-208ENST00000583173 PSMC5P62195 406 aa24.32■■□□□ 1.48
TSEN54-208ENST00000583173 PPFIA1Q13136 1202 aa24.32■■□□□ 1.48
TSEN54-208ENST00000583173 SF3A1Q15459 793 aaKnown RBP24.32■■□□□ 1.48
TSEN54-208ENST00000583173 GRIK4Q16099 956 aa24.32■■□□□ 1.48
TSEN54-208ENST00000583173 NCAPH2Q6IBW4 605 aa24.32■■□□□ 1.48
TSEN54-208ENST00000583173 SERINC5Q86VE9 423 aa24.32■■□□□ 1.48
TSEN54-208ENST00000583173 IGSF22Q8N9C0 903 aa24.32■■□□□ 1.48
TSEN54-208ENST00000583173 BBXQ8WY36 941 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-208ENST00000583173 CEP89Q96ST8 783 aa24.32■■□□□ 1.48
TSEN54-208ENST00000583173 EIF2AK1Q9BQI3 630 aaKnown RBP24.32■■□□□ 1.48
TSEN54-208ENST00000583173 NIFKQ9BYG3 293 aaKnown RBP24.32■■□□□ 1.48
TSEN54-208ENST00000583173 ZMYND8Q9ULU4 1186 aaPredicted RBP24.32■■□□□ 1.48
TSEN54-208ENST00000583173 RRN3P2A6NIE6 340 aa24.31■■□□□ 1.48
TSEN54-208ENST00000583173 F13A1P00488 732 aa24.31■■□□□ 1.48
TSEN54-208ENST00000583173 SPATA31C1P0DKV0 1188 aa24.31■■□□□ 1.48
TSEN54-208ENST00000583173 QARSP47897 775 aaKnown RBP24.31■■□□□ 1.48
TSEN54-208ENST00000583173 PTK7Q13308 1070 aa24.31■■□□□ 1.48
TSEN54-208ENST00000583173 TARBP2Q15633 366 aaKnown RBP24.31■■□□□ 1.48
TSEN54-208ENST00000583173 ZNF484Q5JVG2 852 aa24.31■■□□□ 1.48
TSEN54-208ENST00000583173 ARL6IP4Q66PJ3 421 aaKnown RBP24.31■■□□□ 1.48
TSEN54-208ENST00000583173 BANK1Q8NDB2 785 aa24.31■■□□□ 1.48
TSEN54-208ENST00000583173 TNPO1Q92973 898 aaKnown RBP24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms