RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	BLACE	A4D250	179 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	ASB14	A6NK59	587 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	ANHX	E9PGG2	379 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	VWA5A	O00534	786 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	CDX4	O14627	284 aa	Predicted RBP	6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	ATP2A1	O14983	1001 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	SEMA3E	O15041	775 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	AXIN1	O15169	862 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	PDE8B	O95263	885 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	FGFR2	P21802	821 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	TARS	P26639	723 aa	Known RBP	6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	PDE4A	P27815	886 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	HOXA6	P31267	233 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	NEXN	Q0ZGT2	675 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	SRSF5	Q13243	272 aa	Known RBP	6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	SEMA3F	Q13275	785 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	LETM2	Q2VYF4	491 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	BRDT	Q58F21	947 aa	Predicted RBP	6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	RARS2	Q5T160	578 aa	Known RBP	6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	TCEAL6	Q6IPX3	200 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	GPR149	Q86SP6	731 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	ZNF687	Q8N1G0	1237 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	WNT8B	Q93098	351 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	TCEAL3	Q969E4	200 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	TEX13B	Q9BXU2	312 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	CCDC8	Q9H0W5	538 aa	Predicted RBP	6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	VTA1	Q9NP79	307 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	NUDC	Q9Y266	331 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	RAD50	Q92878	1312 aa		6.17	□□□□□ -1.42
MSI2-216	ENST00000582772	F5	P12259	2224 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	HIDE1	A8MVS5	230 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	RSPH10B2	B2RC85	870 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	CHL1	O00533	1208 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	AFP	P02771	609 aa	Known RBP	6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	RSPH10B	P0C881	870 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	RHD	Q02161	417 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	EML3	Q32P44	896 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	PDXDC1	Q6P996	788 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	KSR2	Q6VAB6	950 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	C15orf39	Q6ZRI6	1047 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	PPP1R13L	Q8WUF5	828 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	RHOBTB2	Q9BYZ6	727 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	FZD8	Q9H461	694 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	SMOC1	Q9H4F8	434 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	PDGFC	Q9NRA1	345 aa		6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	FAM217B	Q9NTX9	383 aa	Predicted RBP	6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	PDS5A	Q29RF7	1337 aa	Known RBP	6.16	□□□□□ -1.42
MSI2-216	ENST00000582772	SPAAR	A0A1B0GVQ0	90 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772		A0A1W2PRG0	241 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	RBM47	A0AV96	593 aa	Known RBP	6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	CAND2	O75155	1236 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	FGF18	O76093	207 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	C8A	P07357	584 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	C8B	P07358	591 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	ITPKB	P27987	946 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	GRN	P28799	593 aa	Known RBP	6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	VASP	P50552	380 aa	Predicted RBP	6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	ADCY1	Q08828	1119 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	SNW1	Q13573	536 aa	Known RBP	6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	HTR4	Q13639	388 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	RAB3GAP1	Q15042	981 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	PKDCC	Q504Y2	493 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	TAF1B	Q53T94	588 aa	Predicted RBP	6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	TAF7L	Q5H9L4	462 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	KIAA1755	Q5JYT7	1200 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	NFXL1	Q6ZNB6	911 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	DZIP1	Q86YF9	867 aa	Known RBP	6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	TMC8	Q8IU68	726 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	MORC4	Q8TE76	937 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	ZNF384	Q8TF68	577 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	BBX	Q8WY36	941 aa	Predicted RBP	6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	MED8	Q96G25	268 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	ZC3H10	Q96K80	434 aa	Known RBP	6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	TRIM34	Q9BYJ4	488 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	COL4A2	P08572	1712 aa		6.15	□□□□□ -1.42
MSI2-216	ENST00000582772	PCSK5	Q92824	1860 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PI4KAP2	A4QPH2	592 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	CHURC1-FNTB	B4DL54	471 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	USP17L12	C9JPN9	530 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	USP17L21	D6R901	530 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772		K7ESF4	209 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	AKAP3	O75969	853 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	IFIT1	P09914	478 aa	Known RBP	6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	GUCY1A2	P33402	732 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	FNTB	P49356	437 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PLCB3	Q01970	1234 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	HNRNPD	Q14103	355 aa	Known RBP	6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PUM3	Q15397	648 aa	Known RBP	6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PLPP4	Q5VZY2	271 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	ATF7IP	Q6VMQ6	1270 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	CEP68	Q76N32	757 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PRICKLE2	Q7Z3G6	844 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	CACNA2D4	Q7Z3S7	1137 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	WDR5B	Q86VZ2	330 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PI4KAP1	Q8N8J0	262 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PLEKHF1	Q96S99	279 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	TCF25	Q9BQ70	676 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	USP26	Q9BXU7	913 aa		6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	PUS3	Q9BZE2	481 aa	Known RBP	6.14	□□□□□ -1.43
MSI2-216	ENST00000582772	TRIM4	Q9C037	500 aa		6.14	□□□□□ -1.43

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms