RNA–Protein interactions for RNA: ENST00000580219.5

SNX11-206, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,200 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-206ENST00000580219 EDIL3O43854 480 aa11□□□□□ -0.65
SNX11-206ENST00000580219 ZNF500O60304 480 aaPredicted RBP11□□□□□ -0.65
SNX11-206ENST00000580219 BMP6P22004 513 aa11□□□□□ -0.65
SNX11-206ENST00000580219 CIITAP33076 1130 aa11□□□□□ -0.65
SNX11-206ENST00000580219 SREBF1P36956 1147 aa11□□□□□ -0.65
SNX11-206ENST00000580219 AFMP43652 599 aa11□□□□□ -0.65
SNX11-206ENST00000580219 KCNB1Q14721 858 aa11□□□□□ -0.65
SNX11-206ENST00000580219 KARSQ15046 597 aaKnown RBP11□□□□□ -0.65
SNX11-206ENST00000580219 FAM83BQ5T0W9 1011 aa11□□□□□ -0.65
SNX11-206ENST00000580219 GRAMD1CQ8IYS0 662 aa11□□□□□ -0.65
SNX11-206ENST00000580219 RASSF8Q8NHQ8 419 aa11□□□□□ -0.65
SNX11-206ENST00000580219 BADQ92934 168 aa11□□□□□ -0.65
SNX11-206ENST00000580219 CALML4Q96GE6 196 aa11□□□□□ -0.65
SNX11-206ENST00000580219 PARK7Q99497 189 aaKnown RBP11□□□□□ -0.65
SNX11-206ENST00000580219 FEZ1Q99689 392 aa11□□□□□ -0.65
SNX11-206ENST00000580219 KBTBD4Q9NVX7 518 aa11□□□□□ -0.65
SNX11-206ENST00000580219 DDX25Q9UHL0 483 aaKnown RBP11□□□□□ -0.65
SNX11-206ENST00000580219 KCNH4Q9UQ05 1017 aa11□□□□□ -0.65
SNX11-206ENST00000580219 MRPL11Q9Y3B7 192 aaKnown RBP11□□□□□ -0.65
SNX11-206ENST00000580219 ABCB11O95342 1321 aa11□□□□□ -0.65
SNX11-206ENST00000580219 LOC285556D6RIA3 1793 aa11□□□□□ -0.65
SNX11-206ENST00000580219 TPRP12270 2363 aaKnown RBP10.99□□□□□ -0.65
SNX11-206ENST00000580219 SPDYE3A6NKU9 549 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 CXCL11O14625 94 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 SLC37A4O43826 429 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 RGS20O76081 388 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 TDP2O95551 362 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 CYP3A4P08684 503 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 FDX1P10109 184 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 CYP2C8P10632 490 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 PPP1R2P41236 205 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 USP14P54578 494 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 BACE1P56817 501 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 ARHGAP4P98171 946 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 AMPD3Q01432 767 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 MTMR2Q13614 643 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 ZYXQ15942 572 aaKnown RBP10.99□□□□□ -0.65
SNX11-206ENST00000580219 Q4G0T1 1027 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 NAALADL2Q58DX5 795 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 SH3D19Q5HYK7 790 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 KIAA1755Q5JYT7 1200 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 SLFN12Q8IYM2 578 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 SPICE1Q8N0Z3 855 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 MICALL1Q8N3F8 863 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 SAMD3Q8N6K7 520 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 DDX27Q96GQ7 796 aaKnown RBP10.99□□□□□ -0.65
SNX11-206ENST00000580219 MTRQ99707 1265 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 LRRC27Q9C0I9 530 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 EHMT1Q9H9B1 1298 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 RRAGDQ9NQL2 400 aaPredicted RBP10.99□□□□□ -0.65
SNX11-206ENST00000580219 IMPACTQ9P2X3 320 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 GBF1Q92538 1859 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 RLFQ13129 1914 aa10.99□□□□□ -0.65
SNX11-206ENST00000580219 WDR87Q6ZQQ6 2873 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 A0A0G2JLL6 359 aaPredicted RBP10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L15C9J2P7 530 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 C19orf81C9J6K1 198 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L13C9JLJ4 530 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L11C9JVI0 530 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L18D6R9N7 530 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L22D6RA61 530 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L17D6RBQ6 530 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L19D6RCP7 530 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L20D6RJB6 530 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 GFRA3O60609 400 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 RPN1P04843 607 aaKnown RBP10.98□□□□□ -0.65
SNX11-206ENST00000580219 NUDT7P0C024 238 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 PLCG1P19174 1290 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 TECP42680 631 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 TXKP42681 527 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 HMGCS2P54868 508 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 GHRHRQ02643 423 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L24Q0WX57 530 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 HYIQ5T013 277 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 ZNF658Q5TYW1 1059 aaPredicted RBP10.98□□□□□ -0.65
SNX11-206ENST00000580219 KRT79Q5XKE5 535 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 ISM2Q6H9L7 571 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 CNNM4Q6P4Q7 775 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 USP17L6PQ6QN14 398 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 PRRT2Q7Z6L0 340 aaPredicted RBP10.98□□□□□ -0.65
SNX11-206ENST00000580219 KCTD17Q8N5Z5 321 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 PRPF38AQ8NAV1 312 aaKnown RBP10.98□□□□□ -0.65
SNX11-206ENST00000580219 CCDC47Q96A33 483 aaKnown RBP10.98□□□□□ -0.65
SNX11-206ENST00000580219 C12orf42Q96LP6 360 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 C7orf25Q9BPX7 421 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 HSD3B7Q9H2F3 369 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 KCNMB3Q9NPA1 279 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 PRDM5Q9NQX1 630 aaPredicted RBP10.98□□□□□ -0.65
SNX11-206ENST00000580219 EMILIN3Q9NT22 766 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 LRWD1Q9UFC0 647 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 RABGAP1Q9Y3P9 1069 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.98□□□□□ -0.65
SNX11-206ENST00000580219 KDM3AQ9Y4C1 1321 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 VPS13AQ96RL7 3174 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 PLXNB2O15031 1838 aa10.98□□□□□ -0.65
SNX11-206ENST00000580219 DMXL1Q9Y485 3027 aa10.97□□□□□ -0.65
SNX11-206ENST00000580219 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.97□□□□□ -0.65
SNX11-206ENST00000580219 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.97□□□□□ -0.65
SNX11-206ENST00000580219 PP2D1A8MPX8 630 aa10.97□□□□□ -0.65
SNX11-206ENST00000580219 OPLAHO14841 1288 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms