RNA–Protein interactions for RNA: ENST00000580158.1

KPNB1-209, Transcript of karyopherin subunit beta 1, human

TSL 2

Gene KPNB1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KPNB1-209	ENST00000580158	ARHGAP8	P85298	464 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	COL9A3	Q14050	684 aa	Predicted RBP	7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	TCTN1	Q2MV58	587 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	TMEM63B	Q5T3F8	832 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	ZNF385C	Q66K41	422 aa	Predicted RBP	7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	GDF6	Q6KF10	455 aa	Predicted RBP	7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	TMED8	Q6PL24	325 aa	Predicted RBP	7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	DTWD2	Q8NBA8	298 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	DBF4B	Q8NFT6	615 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	IL17RA	Q96F46	866 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	RTKN	Q9BST9	563 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	PLVAP	Q9BX97	442 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	KRTAP4-6	Q9BYQ5	205 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	CRNKL1	Q9BZJ0	848 aa	Known RBP	7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	ZNF395	Q9H8N7	513 aa	Predicted RBP	7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	BARX2	Q9UMQ3	279 aa	Predicted RBP	7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	FASN	P49327	2511 aa	Known RBP	7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	KAT6A	Q92794	2004 aa		7.17	□□□□□ -1.26
KPNB1-209	ENST00000580158	KIAA1671	Q9BY89	1806 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	BRD1	O95696	1058 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	SRGAP2B	P0DMP2	458 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	AOC1	P19801	751 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	NRIP1	P48552	1158 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	MARS	P56192	900 aa	Known RBP	7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	RNFT1	Q5M7Z0	435 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	RBM23	Q86U06	439 aa	Known RBP	7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	SESTD1	Q86VW0	696 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	WDR63	Q8IWG1	891 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	AMOTL1	Q8IY63	956 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	DCLK2	Q8N568	766 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	ADAM32	Q8TC27	787 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	SUSD6	Q92537	303 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	SEPT8	Q92599	483 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	SECISBP2L	Q93073	1101 aa	Known RBP	7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	NEK1	Q96PY6	1258 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	IFIH1	Q9BYX4	1025 aa	Known RBP	7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	SLC38A10	Q9HBR0	1119 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	A1CF	Q9NQ94	594 aa	Known RBP	7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	ADD3	Q9UEY8	706 aa	Known RBP	7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158		R4GN57	208 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	LCT	P09848	1927 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	RALGAPA1	Q6GYQ0	2036 aa		7.16	□□□□□ -1.26
KPNB1-209	ENST00000580158	PLXNA4	Q9HCM2	1894 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	DCDC2B	A2VCK2	349 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158		A6NJR5	290 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	SP100	P23497	879 aa	Predicted RBP	7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	ZAP70	P43403	619 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	G3BP1	Q13283	466 aa	Known RBP eCLIP	7.15	□□□□□ -1.26	3e-8	■□□□□ 10.6
KPNB1-209	ENST00000580158	PTK7	Q13308	1070 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	PPP2R5B	Q15173	497 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	TKFC	Q3LXA3	575 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	ZNF618	Q5T7W0	954 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	C7orf31	Q8N865	590 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	MPHOSPH6	Q99547	160 aa	Known RBP	7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	NUP88	Q99567	741 aa	Predicted RBP	7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	KDM4C	Q9H3R0	1056 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	TLE6	Q9H808	572 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	RNF146	Q9NTX7	359 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	NCDN	Q9UBB6	729 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	FEM1B	Q9UK73	627 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	PLAGL2	Q9UPG8	496 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	USP24	Q9UPU5	2620 aa		7.15	□□□□□ -1.26
KPNB1-209	ENST00000580158	OTOGL	Q3ZCN5	2332 aa		7.15	□□□□□ -1.27
KPNB1-209	ENST00000580158	LOC102724159	A0A0B4J2E5	919 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	RSPH10B2	B2RC85	870 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158		F5H6K3	240 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	SRGAP3	O43295	1099 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	AP1G2	O75843	785 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	RSPH10B	P0C881	870 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	CAST	P20810	708 aa	Known RBP	7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	CDK8	P49336	464 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	RAB15	P59190	212 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	LMNB2	Q03252	620 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	PDE4B	Q07343	736 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	KLRC3	Q07444	240 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	PWP2	Q15269	919 aa	Known RBP	7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	NAALADL2	Q58DX5	795 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	PLEKHG4	Q58EX7	1191 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	KIAA1217	Q5T5P2	1943 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	ADGRD2	Q7Z7M1	963 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	LRRC47	Q8N1G4	583 aa	Known RBP	7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	MICAL1	Q8TDZ2	1067 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	MORC4	Q8TE76	937 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	DHX38	Q92620	1227 aa	Known RBP	7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	P2RX5	Q93086	422 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	DYNLL2	Q96FJ2	89 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	BORCS6	Q96GS4	357 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	TRERF1	Q96PN7	1200 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	KATNAL1	Q9BW62	490 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	PIH1D3	Q9NQM4	214 aa	Known RBP	7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	TMPRSS4	Q9NRS4	437 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	GTF2IRD1	Q9UHL9	959 aa		7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	DDX49	Q9Y6V7	483 aa	Known RBP	7.14	□□□□□ -1.27
KPNB1-209	ENST00000580158	GPR179	Q6PRD1	2367 aa		7.13	□□□□□ -1.27
KPNB1-209	ENST00000580158	ADGRA3	Q8IWK6	1321 aa		7.13	□□□□□ -1.27
KPNB1-209	ENST00000580158	RBM47	A0AV96	593 aa	Known RBP	7.13	□□□□□ -1.27
KPNB1-209	ENST00000580158	PI15	O43692	258 aa		7.13	□□□□□ -1.27
KPNB1-209	ENST00000580158	KIN	O60870	393 aa	Known RBP	7.13	□□□□□ -1.27
KPNB1-209	ENST00000580158	GLP2R	O95838	553 aa		7.13	□□□□□ -1.27
KPNB1-209	ENST00000580158	ALAS1	P13196	640 aa		7.13	□□□□□ -1.27

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms