RNA–Protein interactions for RNA: ENST00000578692.1

CRLF3-203, Transcript of cytokine receptor like factor 3, humanhuman

TSL 2

Gene CRLF3, Length 1,392 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-203ENST00000578692 RRN3P2A6NIE6 340 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 CHRNA1P02708 482 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 NEFLP07196 543 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 INSRRP14616 1297 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 IGBP1P78318 339 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 AKAP17AQ02040 695 aaKnown RBP18.1■□□□□ 0.49
CRLF3-203ENST00000578692 ITGB3BPQ13352 177 aaPredicted RBP18.1■□□□□ 0.49
CRLF3-203ENST00000578692 MARCH8Q5T0T0 291 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 MCTP2Q6DN12 878 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 NIPA1Q7RTP0 329 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 RSPH3Q86UC2 560 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 APBB2Q92870 758 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 PHKBQ93100 1093 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 TUBE1Q9UJT0 475 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 NID2Q14112 1375 aa18.1■□□□□ 0.49
CRLF3-203ENST00000578692 MBLAC1A4D2B0 266 aaPredicted RBP18.09■□□□□ 0.49
CRLF3-203ENST00000578692 LINC01553A4QN01 128 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 ATG7O95352 703 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 GNA11P29992 359 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 PDIA3P30101 505 aaKnown RBP18.09■□□□□ 0.49
CRLF3-203ENST00000578692 STAT5BP51692 787 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 EVCP57679 992 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 MRPS5P82675 430 aaKnown RBP18.09■□□□□ 0.49
CRLF3-203ENST00000578692 CACNB1Q02641 598 aaPredicted RBP18.09■□□□□ 0.49
CRLF3-203ENST00000578692 GRB10Q13322 594 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 NTRK3Q16288 839 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 RUFY3Q7L099 469 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 PLPPR4Q7Z2D5 763 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 PLA2G4DQ86XP0 818 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 DNAJB3Q8WWF6 145 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 TOP1MTQ969P6 601 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 ASB2Q96Q27 587 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 TGS1Q96RS0 853 aaKnown RBP18.09■□□□□ 0.49
CRLF3-203ENST00000578692 MICAL3Q7RTP6 2002 aa18.09■□□□□ 0.49
CRLF3-203ENST00000578692 FAM86B1E9PN63 330 aa18.08■□□□□ 0.49
CRLF3-203ENST00000578692 ADAMTS3O15072 1205 aa18.08■□□□□ 0.49
CRLF3-203ENST00000578692 CYP3A4P08684 503 aa18.08■□□□□ 0.49
CRLF3-203ENST00000578692 FAM86B2P0C5J1 330 aa18.08■□□□□ 0.49
CRLF3-203ENST00000578692 ERVK-21P61565 698 aa18.08■□□□□ 0.49
CRLF3-203ENST00000578692 CCT2P78371 535 aaKnown RBP18.08■□□□□ 0.49
CRLF3-203ENST00000578692 HTRA4P83105 476 aaPredicted RBP18.08■□□□□ 0.49
CRLF3-203ENST00000578692 KRT40Q6A162 431 aa18.08■□□□□ 0.49
CRLF3-203ENST00000578692 CRYGNQ8WXF5 182 aa18.08■□□□□ 0.49
CRLF3-203ENST00000578692 RNF26Q9BY78 433 aaPredicted RBP18.08■□□□□ 0.49
CRLF3-203ENST00000578692 IFIH1Q9BYX4 1025 aaKnown RBP18.08■□□□□ 0.49
CRLF3-203ENST00000578692 ZSWIM6Q9HCJ5 1215 aa18.08■□□□□ 0.49
CRLF3-203ENST00000578692 TRPC6Q9Y210 931 aa18.08■□□□□ 0.49
CRLF3-203ENST00000578692 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.07■□□□□ 0.48
CRLF3-203ENST00000578692 DDX39AO00148 427 aaKnown RBP18.07■□□□□ 0.48
CRLF3-203ENST00000578692 LPXNO60711 386 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 PPFIA3O75145 1194 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 UPP2O95045 317 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 IFNAR1P17181 557 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 MGAT3Q09327 533 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 PLCB4Q15147 1175 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 SKIV2LQ15477 1246 aaKnown RBP18.07■□□□□ 0.48
CRLF3-203ENST00000578692 REXO1Q8N1G1 1221 aaKnown RBP18.07■□□□□ 0.48
CRLF3-203ENST00000578692 SLC26A6Q9BXS9 759 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 SUGCTQ9HAC7 445 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 MTUS1Q9ULD2 1270 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 CYP46A1Q9Y6A2 500 aa18.07■□□□□ 0.48
CRLF3-203ENST00000578692 IGLV3-22A0A075B6J6 115 aa18.06■□□□□ 0.48
CRLF3-203ENST00000578692 RPLP2P05387 115 aaKnown RBP18.06■□□□□ 0.48
CRLF3-203ENST00000578692 GHRP10912 638 aa18.06■□□□□ 0.48
CRLF3-203ENST00000578692 TOB2Q14106 344 aaPredicted RBP18.06■□□□□ 0.48
CRLF3-203ENST00000578692 ABHD15Q6UXT9 468 aa18.06■□□□□ 0.48
CRLF3-203ENST00000578692 BICD2Q8TD16 824 aa18.06■□□□□ 0.48
CRLF3-203ENST00000578692 ZBTB10Q96DT7 871 aa18.06■□□□□ 0.48
CRLF3-203ENST00000578692 NCOA5Q9HCD5 579 aaKnown RBP18.06■□□□□ 0.48
CRLF3-203ENST00000578692 LMCD1Q9NZU5 365 aa18.06■□□□□ 0.48
CRLF3-203ENST00000578692 CDY2AQ9Y6F7 541 aa18.06■□□□□ 0.48
CRLF3-203ENST00000578692 IGKV6D-21A0A0A0MT36 114 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 POTEB3A0JP26 581 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 IPO5O00410 1097 aaKnown RBP18.05■□□□□ 0.48
CRLF3-203ENST00000578692 DHX15O43143 795 aaKnown RBP18.05■□□□□ 0.48
CRLF3-203ENST00000578692 CCNE2O96020 404 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 SLC26A2P50443 739 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 LPIN1Q14693 890 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 IER5Q5VY09 327 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 POTEBQ6S5H4 581 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 CCDC148Q8NFR7 591 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 SP7Q8TDD2 431 aaPredicted RBP18.05■□□□□ 0.48
CRLF3-203ENST00000578692 GDPD5Q8WTR4 605 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 YME1L1Q96TA2 773 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 ZNF577Q9BSK1 485 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 TM6SF1Q9BZW5 370 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 FAM49AQ9H0Q0 323 aaPredicted RBP18.05■□□□□ 0.48
CRLF3-203ENST00000578692 PCDHA2Q9Y5H9 948 aa18.05■□□□□ 0.48
CRLF3-203ENST00000578692 BACH1O14867 736 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 MRPS6P82932 125 aaKnown RBP18.04■□□□□ 0.48
CRLF3-203ENST00000578692 FBXO47Q5MNV8 452 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 FAM160B1Q5W0V3 765 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 RASGRP4Q8TDF6 673 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 TRAPPC12Q8WVT3 735 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 ZNF274Q96GC6 653 aaPredicted RBP18.04■□□□□ 0.48
CRLF3-203ENST00000578692 UIMC1Q96RL1 719 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 C17orf80Q9BSJ5 609 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 TBC1D22BQ9NU19 505 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 VPS54Q9P1Q0 977 aa18.04■□□□□ 0.48
CRLF3-203ENST00000578692 PRRC2BQ5JSZ5 2229 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms