RNA–Protein interactions for RNA: ENST00000578217.1

SLC46A1-201, Transcript of solute carrier family 46 member 1, humanhuman

TSL 4

Gene SLC46A1, Length 596 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1-201ENST00000578217 FEZF2Q8TBJ5 459 aa9.47□□□□□ -0.89
SLC46A1-201ENST00000578217 SEPT8Q92599 483 aa9.47□□□□□ -0.89
SLC46A1-201ENST00000578217 ZNF689Q96CS4 500 aaPredicted RBP9.47□□□□□ -0.89
SLC46A1-201ENST00000578217 MRPL42Q9Y6G3 142 aaKnown RBP9.47□□□□□ -0.89
SLC46A1-201ENST00000578217 FRMPD2Q68DX3 1309 aaPredicted RBP9.47□□□□□ -0.89
SLC46A1-201ENST00000578217 ADGRA3Q8IWK6 1321 aa9.47□□□□□ -0.89
SLC46A1-201ENST00000578217 FRYQ5TBA9 3013 aa9.47□□□□□ -0.89
SLC46A1-201ENST00000578217 ANP32CO43423 234 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 TSPY3P0CV98 308 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 TSPY8P0CW00 308 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 HOXD8P13378 290 aaPredicted RBP9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 ATP5JP18859 108 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 HOXC8P31273 242 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 AMHR2Q16671 573 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 CCDC96Q2M329 555 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 SYDE2Q5VT97 1194 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 CWF19L1Q69YN2 538 aaKnown RBP9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 BTNL9Q6UXG8 535 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 KLHL23Q8NBE8 558 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 ATP8B4Q8TF62 1192 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 LINC01599Q8WXQ3 324 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 TAAR1Q96RJ0 339 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 C16orf70Q9BSU1 422 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 REPIN1Q9BWE0 567 aaKnown RBP9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 S1PR5Q9H228 398 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 CPVLQ9H3G5 476 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 GPCPD1Q9NPB8 672 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 DDX41Q9UJV9 622 aaKnown RBP9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 TELO2Q9Y4R8 837 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 ZZEF1O43149 2961 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 CACNA1IQ9P0X4 2223 aa9.46□□□□□ -0.9
SLC46A1-201ENST00000578217 CNOT1A5YKK6 2376 aaKnown RBP9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 IPO8O15397 1037 aaKnown RBP9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 FOXP2O15409 715 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 ASGR2P07307 311 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 IFIT2P09913 472 aaKnown RBP9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 ATF7P17544 494 aaPredicted RBP9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 GATMP50440 423 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 HSDL1Q3SXM5 330 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 TPRNQ4KMQ1 711 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 GIMAP6Q6P9H5 292 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 SYCE2Q6PIF2 218 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 ERC1Q8IUD2 1116 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 SIRT2Q8IXJ6 389 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 DHX37Q8IY37 1157 aaKnown RBP9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 DNERQ8NFT8 737 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 PPTC7Q8NI37 304 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 GPKOWQ92917 476 aaPredicted RBP eCLIP9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 STX8Q9UNK0 236 aa9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.45□□□□□ -0.9
SLC46A1-201ENST00000578217 GPAA1O43292 621 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 CHRNA1P02708 482 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 TDO2P48775 406 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 SP2Q02086 613 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 BTG3Q14201 252 aaPredicted RBP9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 ZBTB33Q86T24 672 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 ITPRIPQ8IWB1 547 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 CRIPAKQ8N1N5 446 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 CLASRPQ8N2M8 674 aaKnown RBP9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 DCLK2Q8N568 766 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 SYTL5Q8TDW5 730 aaPredicted RBP9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 POF1BQ8WVV4 589 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 ATP6V0A1Q93050 837 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 EMID1Q96A84 441 aaPredicted RBP9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 SEC62Q99442 399 aaKnown RBP9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 RNPEPQ9H4A4 650 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 DLL3Q9NYJ7 618 aa9.44□□□□□ -0.9
SLC46A1-201ENST00000578217 DOCK5Q9H7D0 1870 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 C2CD4DB7Z1M9 353 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 ENPP3O14638 875 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 PPFIA3O75145 1194 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 DGKIO75912 1065 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 SMIM10L2AP0DMW4 78 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 SMIM10L2BP0DMW5 78 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 GHRP10912 638 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 NPR3P17342 541 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 NOVP48745 357 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 CTDSPL2Q05D32 466 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 KCNC3Q14003 757 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 USH1GQ495M9 461 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 PAN2Q504Q3 1202 aaKnown RBP9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 TSHZ3Q63HK5 1081 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 RUFY4Q6ZNE9 571 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 RTN4RL1Q86UN2 441 aaPredicted RBP9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 IFNL3Q8IZI9 196 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 PLVAPQ9BX97 442 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 TLE6Q9H808 572 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 SETD4Q9NVD3 440 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 R4GN57 208 aa9.43□□□□□ -0.9
SLC46A1-201ENST00000578217 C17orf102A2RUQ5 167 aa9.42□□□□□ -0.9
SLC46A1-201ENST00000578217 APPP05067 770 aa9.42□□□□□ -0.9
SLC46A1-201ENST00000578217 WEE2P0C1S8 567 aa9.42□□□□□ -0.9
SLC46A1-201ENST00000578217 EIF2AK2P19525 551 aaKnown RBP9.42□□□□□ -0.9
SLC46A1-201ENST00000578217 ERVFC1P60507 584 aa9.42□□□□□ -0.9
SLC46A1-201ENST00000578217 PPARAQ07869 468 aa9.42□□□□□ -0.9
SLC46A1-201ENST00000578217 PUM1Q14671 1186 aaKnown RBP eCLIP9.42□□□□□ -0.9
SLC46A1-201ENST00000578217 LPIN1Q14693 890 aa9.42□□□□□ -0.9
SLC46A1-201ENST00000578217 ANGPT1Q15389 498 aa9.42□□□□□ -0.9
SLC46A1-201ENST00000578217 FAM26DQ5JW98 314 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms