RNA–Protein interactions for RNA: ENST00000578112.5

SMARCE1-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,384 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-214ENST00000578112 NIPA1Q7RTP0 329 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 RAPGEFL1Q9UHV5 662 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 TUBE1Q9UJT0 475 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 TRPV2Q9Y5S1 764 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 ATG2AQ2TAZ0 1938 aa12.89□□□□□ -0.35
SMARCE1-214ENST00000578112 DGKIO75912 1065 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 ANTXR2P58335 489 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 UTP14CQ5TAP6 766 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 PSTPIP2Q9H939 334 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 PCDHA2Q9Y5H9 948 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 SMIM35A0A1B0GVV1 85 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 GSTTP1A0A1W2PQM5 241 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 CCDC69A6NI79 296 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 SPDYE3A6NKU9 549 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 SH2B2O14492 632 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 CTSHP09668 335 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 RCAN1P53805 252 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 BMP8AQ7Z5Y6 402 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 CDCA3Q99618 268 aaPredicted RBP12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 CD320Q9NPF0 282 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 C1orf112Q9NSG2 853 aa12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 RBM28Q9NW13 759 aaKnown RBP12.88□□□□□ -0.35
SMARCE1-214ENST00000578112 TTC28Q96AY4 2481 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 NEFLP07196 543 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 PTH1RQ03431 593 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 MTMR1Q13613 665 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 HERC4Q5GLZ8 1057 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 CRIPAKQ8N1N5 446 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 RSPH1Q8WYR4 309 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 MFSD14AQ96MC6 490 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 IL25Q9H293 177 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 AZI2Q9H6S1 392 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 RTEL1Q9NZ71 1219 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 DOCK5Q9H7D0 1870 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 EYA4O95677 639 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 BTG3Q14201 252 aaPredicted RBP12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 SGMS1Q86VZ5 419 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 ANP32EQ9BTT0 268 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 CD207Q9UJ71 328 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 CDY2AQ9Y6F7 541 aa12.87□□□□□ -0.35
SMARCE1-214ENST00000578112 TTC3P53804 2025 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 CARNS1A5YM72 827 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 MBTPS2O43462 519 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 ATG7O95352 703 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 PDE4AP27815 886 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 COASYQ13057 564 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 AP3B2Q13367 1082 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 ADAM15Q13444 863 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 SDF4Q9BRK5 362 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 JPH1Q9HDC5 661 aaPredicted RBP12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 AAASQ9NRG9 546 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 CLDND1Q9NY35 253 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 SLC9A2Q9UBY0 812 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 KIAA1671Q9BY89 1806 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 IGSF9BQ9UPX0 1349 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 PRC1O43663 620 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 UPP2O95045 317 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 GHRP10912 638 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 HYAL1Q12794 435 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 MARCH8Q5T0T0 291 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 USP17L6PQ6QN14 398 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 RUFY4Q6ZNE9 571 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 TMTC3Q6ZXV5 915 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 EFHBQ8N7U6 833 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 EXOC6Q8TAG9 804 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 KHSRPQ92945 711 aaKnown RBP eCLIP12.86□□□□□ -0.356e-7■■■■■ 30.3
SMARCE1-214ENST00000578112 MXRA8Q9BRK3 442 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 PCDHA6Q9UN73 950 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 PCDHA8Q9Y5H6 950 aa12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 RBM8AQ9Y5S9 174 aaKnown RBP12.86□□□□□ -0.35
SMARCE1-214ENST00000578112 ITGB5P18084 799 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 NUBP1P53384 320 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 TRIM50Q86XT4 487 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 GLG1Q92896 1179 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 SENP2Q9HC62 589 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 SORBS3O60504 671 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 LTBRP36941 435 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 SARSP49591 514 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 CBX2Q14781 532 aaPredicted RBP12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 FAM160B1Q5W0V3 765 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 NFXL1Q6ZNB6 911 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 SRBD1Q8N5C6 995 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 CELF4Q9BZC1 486 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 ELAC1Q9H777 363 aaKnown RBP12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 RIC8AQ9NPQ8 531 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 PLAGL2Q9UPG8 496 aa12.85□□□□□ -0.35
SMARCE1-214ENST00000578112 CHD9Q3L8U1 2897 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 IGKV6D-21A0A0A0MT36 114 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 SRGAP2BP0DMP2 458 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 ATF7P17544 494 aaPredicted RBP12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 PAK2Q13177 524 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 ZNF484Q5JVG2 852 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 SYNE3Q6ZMZ3 975 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 DNAJB3Q8WWF6 145 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 MSLNLQ96KJ4 702 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 IRF2BPLQ9H1B7 796 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 BCAS3Q9H6U6 928 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 LZTS1Q9Y250 596 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 SLC12A7Q9Y666 1083 aa12.84□□□□□ -0.35
SMARCE1-214ENST00000578112 GRM6O15303 877 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms