RNA–Protein interactions for RNA: ENST00000576409.5

ATPAF1-214, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF1, Length 4,158 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-214ENST00000576409 TSNAXIP1Q2TAA8 658 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 BSDC1Q9NW68 430 aaPredicted RBP19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 CHORDC1Q9UHD1 332 aaPredicted RBP19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 ZSCAN5CA6NGD5 496 aaPredicted RBP19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 KLRC1P26715 233 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 KCNV2Q8TDN2 545 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 ARHGEF10LQ9HCE6 1279 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 BARHL2Q9NY43 387 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 CEP72Q9P209 647 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 DNAJC12Q9UKB3 198 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 EIF3HO15372 352 aaKnown RBP eCLIP19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 KRT19P08727 400 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 TRIM49P0CI25 452 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 TRIM49CP0CI26 452 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 COPB2P35606 906 aa19.4■□□□□ 0.7
ATPAF1-214ENST00000576409 ZNF18P17022 549 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 TROAPQ12815 778 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 MYO1EQ12965 1108 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 CCDC62Q6P9F0 684 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 TAF1DQ9H5J8 278 aaPredicted RBP19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 MYMKA6NI61 221 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 TCP10L2B9ZVM9 353 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 USP17L10C9JJH3 530 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 PMS1P54277 932 aaKnown RBP19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 NKX1-1Q15270 411 aaPredicted RBP19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 MUM1L1Q5H9M0 696 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 CASC4Q6P4E1 433 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 SCYL3Q8IZE3 742 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 CSF1RP07333 972 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 PSMD6Q15008 389 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 CLUL1Q15846 466 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 CCDC89Q8N998 374 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 TRIM51Q9BSJ1 452 aa19.39■□□□□ 0.69
ATPAF1-214ENST00000576409 MEFVO15553 781 aaPredicted RBP19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 ZRANB2O95218 330 aaKnown RBP eCLIP19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 TTLL12Q14166 644 aaPredicted RBP19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 PPP2R5EQ16537 467 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 ASPRV1Q53RT3 343 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 CCDC93Q567U6 631 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 INTUQ9ULD6 942 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 ADGRB2O60241 1585 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 COL15A1P39059 1388 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 TTI1O43156 1089 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 PRKG1Q13976 671 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 GUF1Q8N442 669 aaKnown RBP19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 HNRNPLLQ8WVV9 542 aaKnown RBP19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 HVCN1Q96D96 273 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 CELF4Q9BZC1 486 aaKnown RBP19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 PXDNLA1KZ92 1463 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 LSP1P33241 339 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 PALM2Q8IXS6 379 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 FAM167BQ9BTA0 163 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 AZI2Q9H6S1 392 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 DBNDD1Q9H9R9 158 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 NOC2LQ9Y3T9 749 aaKnown RBP19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 ARAP3Q8WWN8 1544 aa19.38■□□□□ 0.69
ATPAF1-214ENST00000576409 PSMD14O00487 310 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 PDE6CP51160 858 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 DYNLT1P63172 113 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 RASA3Q14644 834 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 TTBK2Q6IQ55 1244 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 PDXDC1Q6P996 788 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 RNPC3Q96LT9 517 aaKnown RBP19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 SH2D4AQ9H788 454 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 LMTK2Q8IWU2 1503 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 GCLMP48507 274 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 TRPC3Q13507 836 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 POMGNT1Q8WZA1 660 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 RAD54LQ92698 747 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 HAUS1Q96CS2 278 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 ANO3Q9BYT9 981 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 TARSL2A2RTX5 802 aaKnown RBP19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 MAPK4P31152 587 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 PPP2R2AP63151 447 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 GPATCH4Q5T3I0 446 aaKnown RBP19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 LRRC8CQ8TDW0 803 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 DEPDC5O75140 1603 aa19.37■□□□□ 0.69
ATPAF1-214ENST00000576409 ECEL1O95672 775 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 SLC9A1P19634 815 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 CUL1Q13616 776 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 GLE1Q53GS7 698 aaKnown RBP19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 CFAP157Q5JU67 520 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 SRRM1Q8IYB3 904 aaKnown RBP19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 RAD51CO43502 376 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 KCNQ2O43526 872 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 CORO7P57737 925 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 FAM217BQ9NTX9 383 aaPredicted RBP19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 TPX2Q9ULW0 747 aaKnown RBP19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 CLRN2A0PK11 232 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 RHOBTB3O94955 611 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 CCDC110Q8TBZ0 833 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 MDM1Q8TC05 714 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 ZNF473Q8WTR7 871 aaKnown RBP19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 NSUN4Q96CB9 384 aaKnown RBP19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 CPSF2Q9P2I0 782 aaKnown RBP19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 ITIH6Q6UXX5 1313 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 PNPLA7Q6ZV29 1317 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 ARHGAP42A6NI28 874 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 PSMD2Q13200 908 aa19.36■□□□□ 0.69
ATPAF1-214ENST00000576409 GIMAP8Q8ND71 665 aaPredicted RBP19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms