RNA–Protein interactions for RNA: ENST00000575116.1

PRPF8-212, Transcript of pre-mRNA processing factor 8, human

TSL 3

Gene PRPF8, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-212	ENST00000575116	ARHGAP1	Q07960	439 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	ZRSR1	Q15695	479 aa	Known RBP	13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	ECM1	Q16610	540 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	NAALADL2	Q58DX5	795 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	PRAMEF19	Q5SWL8	479 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	PDXDC2P	Q6P474	469 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	SH3RF1	Q7Z6J0	888 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	TPH2	Q8IWU9	490 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	C4orf19	Q8IY42	314 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	SLAIN1	Q8ND83	568 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	LARP4B	Q92615	738 aa	Known RBP	13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	ATP6V0A1	Q93050	837 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	SPATA33	Q96N06	139 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	TNMD	Q9H2S6	317 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	BLOC1S4	Q9NUP1	217 aa		13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	GNE	Q9Y223	722 aa	Known RBP	13.32	□□□□□ -0.28
PRPF8-212	ENST00000575116	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	POTEB3	A0JP26	581 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	NOP56	O00567	594 aa	Known RBP	13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	EYA4	O95677	639 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	AKR1A1	P14550	325 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	CYP4A11	Q02928	519 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	CACNB2	Q08289	660 aa	Predicted RBP	13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	CTTN	Q14247	550 aa	Known RBP	13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	FAM160B1	Q5W0V3	765 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	SWSAP1	Q6NVH7	229 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	POTEB	Q6S5H4	581 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	RBM43	Q6ZSC3	357 aa	Known RBP	13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	SV2B	Q7L1I2	683 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	PPTC7	Q8NI37	304 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	AFAP1L1	Q8TED9	768 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	RAD54L	Q92698	747 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	COPS5	Q92905	334 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	PAGE5	Q96GU1	130 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	PLIN2	Q99541	437 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	GPR20	Q99678	358 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	LXN	Q9BS40	222 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	KBTBD4	Q9NVX7	518 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	TSKS	Q9UJT2	592 aa		13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	MAFB	Q9Y5Q3	323 aa	Predicted RBP	13.31	□□□□□ -0.28
PRPF8-212	ENST00000575116	DOCK5	Q9H7D0	1870 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	POTEF	A5A3E0	1075 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	SEPT4	O43236	478 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	DUSP11	O75319	330 aa	Known RBP	13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	PPFIA4	O75335	1185 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	LGR5	O75473	907 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	TCF7	P36402	384 aa	Predicted RBP	13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	SLC26A2	P50443	739 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	SP4	Q02446	784 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	CAMK4	Q16566	473 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	HSDL1	Q3SXM5	330 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	MAP3K21	Q5TCX8	1036 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	POTEG	Q6S5H5	508 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	PLPPR4	Q7Z2D5	763 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	BANK1	Q8NDB2	785 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	AZI2	Q9H6S1	392 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	ZNF302	Q9NR11	478 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	ANKEF1	Q9NU02	776 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	GABBR1	Q9UBS5	961 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	DBR1	Q9UK59	544 aa	Known RBP	13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116	TRIM17	Q9Y577	477 aa		13.3	□□□□□ -0.28
PRPF8-212	ENST00000575116		A6NJR5	290 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116		E9PMD0	336 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	BACH1	O14867	736 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	GTPBP6	O43824	516 aa	Predicted RBP	13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	SORBS3	O60504	671 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	PLA2G4B	P0C869	781 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	HOXD8	P13378	290 aa	Predicted RBP	13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	ELN	P15502	786 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	GRK4	P32298	578 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	STAT5B	P51692	787 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	NKX3-2	P78367	333 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	MCM6	Q14566	821 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	POSTN	Q15063	836 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	XKR3	Q5GH77	459 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	TMEM63B	Q5T3F8	832 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	CNNM4	Q6P4Q7	775 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	OTUD6A	Q7L8S5	288 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	KCNK18	Q7Z418	384 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	CCDC60	Q8IWA6	550 aa	Predicted RBP	13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	SYT2	Q8N9I0	419 aa	Predicted RBP	13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	TRPV1	Q8NER1	839 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	OR6J1	Q8NGC5	347 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	LRRC15	Q8TF66	581 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	C7orf25	Q9BPX7	421 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	AP5M1	Q9H0R1	490 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	SMARCAD1	Q9H4L7	1026 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	KCND2	Q9NZV8	630 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	WRAP73	Q9P2S5	460 aa	Predicted RBP	13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	PTPN22	Q9Y2R2	807 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	EMSY	Q7Z589	1322 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	IGSF9B	Q9UPX0	1349 aa		13.29	□□□□□ -0.28
PRPF8-212	ENST00000575116	DYNC1LI2	O43237	492 aa	Predicted RBP	13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	ADCY6	O43306	1168 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	SMC2	O95347	1197 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	PRKAR2A	P13861	404 aa	Known RBP	13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	AFM	P43652	599 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	SLC12A3	P55017	1021 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	PSMC6	P62333	389 aa		13.28	□□□□□ -0.28
PRPF8-212	ENST00000575116	UGCG	Q16739	394 aa		13.28	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms