RNA–Protein interactions for RNA: ENST00000574897.5

NPLOC4-217, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 2,365 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-217ENST00000574897 NEK11Q8NG66 645 aa26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 FZD1Q9UP38 647 aa26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 ZSCAN20P17040 1043 aaPredicted RBP26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 HNRNPH3P31942 346 aaKnown RBP26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 ZC3H3Q8IXZ2 948 aaKnown RBP26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 CCDC170Q8IYT3 715 aa26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 CLEC4DQ8WXI8 215 aa26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 RAVER2Q9HCJ3 691 aaKnown RBP26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 DDX41Q9UJV9 622 aaKnown RBP26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.12■■□□□ 1.77
NPLOC4-217ENST00000574897 NOL4O94818 638 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 ITGB5P18084 799 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 KRT83P78385 493 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 KNOP1Q1ED39 458 aaKnown RBP26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 CCDC42Q96M95 316 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 MYO1AQ9UBC5 1043 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 STK24Q9Y6E0 443 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 ALAS1P13196 640 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 EIF4A3P38919 411 aaKnown RBP26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 HSD17B4P51659 736 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 CDK17Q00537 523 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 MUM1L1Q5H9M0 696 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 TUFT1Q9NNX1 390 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 HDAC6Q9UBN7 1215 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 HACL1Q9UJ83 578 aa26.11■■□□□ 1.77
NPLOC4-217ENST00000574897 TBCAO75347 108 aaKnown RBP26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 KIF20AO95235 890 aa26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 GCNT3O95395 438 aa26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 MARSP56192 900 aaKnown RBP26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 NBPF12Q5TAG4 269 aaPredicted RBP26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 PRPF38AQ8NAV1 312 aaKnown RBP26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 LSM14BQ9BX40 385 aaKnown RBP26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 EHMT1Q9H9B1 1298 aa26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 PARP14Q460N5 1801 aa26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 EDRF1Q3B7T1 1238 aa26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 PRAMEF18Q5VWM3 479 aa26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 CACNA2D4Q7Z3S7 1137 aa26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 SRGAP1Q7Z6B7 1085 aa26.1■■□□□ 1.77
NPLOC4-217ENST00000574897 IPO5O00410 1097 aaKnown RBP26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 CETN3O15182 167 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 WDR46O15213 610 aaKnown RBP26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 NMT1P30419 496 aaKnown RBP26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 AMPD2Q01433 879 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 MTMR2Q13614 643 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 PDXDC1Q6P996 788 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 BANK1Q8NDB2 785 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 WDR11Q9BZH6 1224 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 ASTN1O14525 1302 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 KIF11P52732 1056 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 CHMP4BP1P59074 171 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 C1orf186Q6ZWK4 172 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 KSR1Q8IVT5 923 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 IQCDQ96DY2 449 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 MXRA8Q9BRK3 442 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 TRAF3IP3Q9Y228 551 aa26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 COL11A1P12107 1806 aaPredicted RBP26.09■■□□□ 1.77
NPLOC4-217ENST00000574897 CLIC2O15247 247 aa26.08■■□□□ 1.77
NPLOC4-217ENST00000574897 GNA14O95837 355 aa26.08■■□□□ 1.77
NPLOC4-217ENST00000574897 TNFAIP1Q13829 316 aa26.08■■□□□ 1.77
NPLOC4-217ENST00000574897 ZC2HC1CQ53FD0 456 aaPredicted RBP26.08■■□□□ 1.77
NPLOC4-217ENST00000574897 GOLGA1Q92805 767 aa26.08■■□□□ 1.77
NPLOC4-217ENST00000574897 KIAA1683Q9H0B3 1180 aa26.08■■□□□ 1.77
NPLOC4-217ENST00000574897 DEFB129Q9H1M3 183 aa26.08■■□□□ 1.77
NPLOC4-217ENST00000574897 CNOT7Q9UIV1 285 aaKnown RBP26.08■■□□□ 1.77
NPLOC4-217ENST00000574897 MACROD2A1Z1Q3 448 aa26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 FLOT1O75955 427 aa26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 IPO7O95373 1038 aaKnown RBP26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 ATP1A1P05023 1023 aaKnown RBP26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 CASP4P49662 377 aa26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 KCNH2Q12809 1159 aa26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 PPP4R3CPQ6ZMV5 832 aa26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 DOCK1Q14185 1865 aa26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 POLR2FP61218 127 aaKnown RBP26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 B3GNT9Q6UX72 402 aa26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 WNK4Q96J92 1243 aa26.07■■□□□ 1.76
NPLOC4-217ENST00000574897 KRT86O43790 486 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 AKAP3O75969 853 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 SEC31AO94979 1220 aaKnown RBP26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 FAM13AO94988 1023 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 VCAM1P19320 739 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 VAV2P52735 878 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 MYCT1Q8N699 235 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 PURBQ96QR8 312 aaKnown RBP26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 LXNQ9BS40 222 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 TEKT3Q9BXF9 490 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 TLR2O60603 784 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 HGSNATQ68CP4 663 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 TEX2Q8IWB9 1127 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 DEF6Q9H4E7 631 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 SLC38A10Q9HBR0 1119 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 KCNH7Q9NS40 1196 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 MYO6Q9UM54 1294 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 RPTORQ8N122 1335 aa26.06■■□□□ 1.76
NPLOC4-217ENST00000574897 ZMYM2Q9UBW7 1377 aa26.05■■□□□ 1.76
NPLOC4-217ENST00000574897 SETQ01105 290 aaPredicted RBP26.05■■□□□ 1.76
NPLOC4-217ENST00000574897 GPR161Q8N6U8 529 aaKnown RBP26.05■■□□□ 1.76
NPLOC4-217ENST00000574897 LPAR1Q92633 364 aa26.05■■□□□ 1.76
NPLOC4-217ENST00000574897 MTFR1LQ9H019 292 aa26.05■■□□□ 1.76
NPLOC4-217ENST00000574897 OGFRQ9NZT2 677 aa26.05■■□□□ 1.76
NPLOC4-217ENST00000574897 LOXHD1Q8IVV2 1947 aa26.05■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms