RNA–Protein interactions for RNA: ENST00000574437.5

ABR-228, Transcript of ABR, RhoGEF and GTPase activating protein, humanhuman

TSL 5 BASIC

Gene ABR, Length 3,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABR-228ENST00000574437 COL23A1Q86Y22 540 aaPredicted RBP16.28■□□□□ 0.2
ABR-228ENST00000574437 TRIM59Q8IWR1 403 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 RIOX1Q9H6W3 641 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 PCDHGC5Q9Y5F6 944 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 ESYT2A0FGR8 921 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 CETN3O15182 167 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 PLA2G4BP0C869 781 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 SLC27A3Q5K4L6 730 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 TRIM31Q9BZY9 425 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 IBSPP21815 317 aaPredicted RBP16.28■□□□□ 0.2
ABR-228ENST00000574437 STAT3P40763 770 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 POTEAQ6S8J7 498 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 DPP8Q6V1X1 898 aaPredicted RBP16.28■□□□□ 0.2
ABR-228ENST00000574437 SYN2Q92777 582 aaPredicted RBP16.28■□□□□ 0.2
ABR-228ENST00000574437 HAS1Q92839 578 aa16.28■□□□□ 0.2
ABR-228ENST00000574437 RGS17Q9UGC6 210 aaPredicted RBP16.28■□□□□ 0.2
ABR-228ENST00000574437 TAF1LQ8IZX4 1826 aa16.27■□□□□ 0.2
ABR-228ENST00000574437 F8W031 263 aaPredicted RBP16.27■□□□□ 0.2
ABR-228ENST00000574437 KIF4AO95239 1232 aa16.27■□□□□ 0.2
ABR-228ENST00000574437 SETQ01105 290 aaPredicted RBP16.27■□□□□ 0.2
ABR-228ENST00000574437 ORC2Q13416 577 aaPredicted RBP16.27■□□□□ 0.2
ABR-228ENST00000574437 KCNV1Q6PIU1 500 aa16.27■□□□□ 0.2
ABR-228ENST00000574437 MYCBPAPQ8TBZ2 947 aa16.27■□□□□ 0.2
ABR-228ENST00000574437 SCFD1Q8WVM8 642 aa16.27■□□□□ 0.2
ABR-228ENST00000574437 CEP63Q96MT8 703 aa16.27■□□□□ 0.2
ABR-228ENST00000574437 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.2
ABR-228ENST00000574437 SNED1Q8TER0 1413 aa16.27■□□□□ 0.2
ABR-228ENST00000574437 HMGB1P1B2RPK0 211 aaPredicted RBP16.27■□□□□ 0.19
ABR-228ENST00000574437 ATP2C2O75185 946 aa16.27■□□□□ 0.19
ABR-228ENST00000574437 HSD17B3P37058 310 aa16.27■□□□□ 0.19
ABR-228ENST00000574437 USP8P40818 1118 aa16.27■□□□□ 0.19
ABR-228ENST00000574437 ZNF571Q7Z3V5 609 aaPredicted RBP16.27■□□□□ 0.19
ABR-228ENST00000574437 SUGP1Q8IWZ8 645 aaKnown RBP16.27■□□□□ 0.19
ABR-228ENST00000574437 RPGRQ92834 1020 aaKnown RBP16.27■□□□□ 0.19
ABR-228ENST00000574437 MEIS1O00470 390 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 KRIT1O00522 736 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 MPHOSPH10O00566 681 aaKnown RBP16.26■□□□□ 0.19
ABR-228ENST00000574437 SART1O43290 800 aaKnown RBP16.26■□□□□ 0.19
ABR-228ENST00000574437 GNA14O95837 355 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 TMOD1P28289 359 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 NT5C2P49902 561 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 MFSD14BQ5SR56 506 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 ALKBH5Q6P6C2 394 aaKnown RBP16.26■□□□□ 0.19
ABR-228ENST00000574437 DPH5Q9H2P9 285 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L15C9J2P7 530 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L13C9JLJ4 530 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L11C9JVI0 530 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L18D6R9N7 530 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L22D6RA61 530 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L17D6RBQ6 530 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L19D6RCP7 530 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L20D6RJB6 530 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 UFL1O94874 794 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L24Q0WX57 530 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 USP17L6PQ6QN14 398 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 KCTD1Q719H9 257 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 PEX26Q7Z412 305 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 ADGRF4Q8IZF3 695 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 AMACRQ9UHK6 382 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 AKR1B1P15121 316 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 SF3A3Q12874 501 aaKnown RBP eCLIP16.26■□□□□ 0.19
ABR-228ENST00000574437 ITGB3BPQ13352 177 aaPredicted RBP16.26■□□□□ 0.19
ABR-228ENST00000574437 SF3B2Q13435 895 aaKnown RBP16.26■□□□□ 0.19
ABR-228ENST00000574437 PRPF4BQ13523 1007 aaKnown RBP16.26■□□□□ 0.19
ABR-228ENST00000574437 CUL5Q93034 780 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 NT5C3AQ9H0P0 336 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 PSTPIP2Q9H939 334 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 MTMR4Q9NYA4 1195 aa16.26■□□□□ 0.19
ABR-228ENST00000574437 ARMCX3Q9UH62 379 aaPredicted RBP16.26■□□□□ 0.19
ABR-228ENST00000574437 POTEFA5A3E0 1075 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 TULP1O00294 542 aaPredicted RBP16.25■□□□□ 0.19
ABR-228ENST00000574437 POTEIP0CG38 1075 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 MRPL12P52815 198 aaKnown RBP16.25■□□□□ 0.19
ABR-228ENST00000574437 POTEGQ6S5H5 508 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 POTEEQ6S8J3 1075 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 ADAT2Q7Z6V5 191 aaKnown RBP16.25■□□□□ 0.19
ABR-228ENST00000574437 MREGQ8N565 214 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 ISCUQ9H1K1 167 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 JMJD4Q9H9V9 463 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 AIPL1Q9NZN9 384 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 DAPK3O43293 454 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 LY75O60449 1722 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 ITGA4P13612 1032 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 ADRA2BP18089 450 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 HSPA9P38646 679 aaKnown RBP16.25■□□□□ 0.19
ABR-228ENST00000574437 CASP5P51878 434 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 CCDC88AQ3V6T2 1871 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 ARFGAP2Q8N6H7 521 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 NEUROG2Q9H2A3 272 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 GANQ9H2C0 597 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 TMBIM4Q9HC24 238 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 FBXL5Q9UKA1 691 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 LEMD3Q9Y2U8 911 aa16.25■□□□□ 0.19
ABR-228ENST00000574437 NOC2LQ9Y3T9 749 aaKnown RBP16.25■□□□□ 0.19
ABR-228ENST00000574437 USP17L10C9JJH3 530 aa16.24■□□□□ 0.19
ABR-228ENST00000574437 PGRMC1O00264 195 aaKnown RBP16.24■□□□□ 0.19
ABR-228ENST00000574437 POLRMTO00411 1230 aaKnown RBP16.24■□□□□ 0.19
ABR-228ENST00000574437 UCHL3P15374 230 aa16.24■□□□□ 0.19
ABR-228ENST00000574437 FLT3P36888 993 aa16.24■□□□□ 0.19
ABR-228ENST00000574437 PABPC4Q13310 644 aaKnown RBP eCLIP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms