RNA–Protein interactions for RNA: ENST00000574408.5

USP43-205, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 3,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-205ENST00000574408 KRT26Q7Z3Y9 468 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 ZNF397Q8NF99 534 aaPredicted RBP11.56□□□□□ -0.56
USP43-205ENST00000574408 SMCR8Q8TEV9 937 aaPredicted RBP11.56□□□□□ -0.56
USP43-205ENST00000574408 CEP63Q96MT8 703 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 SFI1A8K8P3 1242 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 EPHB6O15197 1021 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 ZBED4O75132 1171 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 MYBP10242 640 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 ADAM9Q13443 819 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 ELF2Q15723 593 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 FIGNQ5HY92 759 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 APOBEC3FQ8IUX4 373 aaKnown RBP11.56□□□□□ -0.56
USP43-205ENST00000574408 CCDC155Q8N6L0 562 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 SYTL5Q8TDW5 730 aaPredicted RBP11.56□□□□□ -0.56
USP43-205ENST00000574408 ATG4CQ96DT6 458 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 FAM13AO94988 1023 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 ABL1P00519 1130 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 BACE1P56817 501 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 MEA1Q16626 185 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 ZNF569Q5MCW4 686 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 MNS1Q8NEH6 495 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 KCNH7Q9NS40 1196 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 GGA3Q9NZ52 723 aa11.56□□□□□ -0.56
USP43-205ENST00000574408 RPTORQ8N122 1335 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 A0A1W2PQJ5 194 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 CETN3O15182 167 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 GCNT3O95395 438 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 EIF2AK2P19525 551 aaKnown RBP11.55□□□□□ -0.56
USP43-205ENST00000574408 NR2F2P24468 414 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 RPS6P62753 249 aaKnown RBP11.55□□□□□ -0.56
USP43-205ENST00000574408 EPHA7Q15375 998 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 NSMFQ6X4W1 530 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 KCTD17Q8N5Z5 321 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 ZNF280CQ8ND82 737 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 LXNQ9BS40 222 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 CARD6Q9BX69 1037 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 WRAP73Q9P2S5 460 aaPredicted RBP11.55□□□□□ -0.56
USP43-205ENST00000574408 REXO2Q9Y3B8 237 aaKnown RBP11.55□□□□□ -0.56
USP43-205ENST00000574408 ZHX2Q9Y6X8 837 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 GNA14O95837 355 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 ZSCAN20P17040 1043 aaPredicted RBP11.55□□□□□ -0.56
USP43-205ENST00000574408 PTPRAP18433 802 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 ARHGAP25P42331 645 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 HMGCS2P54868 508 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 KNOP1Q1ED39 458 aaKnown RBP11.55□□□□□ -0.56
USP43-205ENST00000574408 PPP4R3CPQ6ZMV5 832 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 GPIHBP1Q8IV16 184 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 IQCDQ96DY2 449 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 WNK4Q96J92 1243 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 NACC1Q96RE7 527 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 TAAR1Q96RJ0 339 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 RIT2Q99578 217 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 AS3MTQ9HBK9 375 aa11.55□□□□□ -0.56
USP43-205ENST00000574408 EDRF1Q3B7T1 1238 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 ARHGAP27Q6ZUM4 889 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 MIER3Q7Z3K6 550 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 MYCT1Q8N699 235 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 GPRC5DQ9NZD1 345 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.54□□□□□ -0.56
USP43-205ENST00000574408 MYCLP12524 364 aaPredicted RBP11.54□□□□□ -0.56
USP43-205ENST00000574408 GAP43P17677 238 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 HOXD13P35453 343 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 CYLC1P35663 651 aaPredicted RBP11.54□□□□□ -0.56
USP43-205ENST00000574408 ERCC6LQ2NKX8 1250 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 TKFCQ3LXA3 575 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 C1orf186Q6ZWK4 172 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 EPM2AIP1Q7L775 607 aaPredicted RBP11.54□□□□□ -0.56
USP43-205ENST00000574408 NEK11Q8NG66 645 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 ZSWIM4Q9H7M6 989 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 NHEJ1Q9H9Q4 299 aaPredicted RBP11.54□□□□□ -0.56
USP43-205ENST00000574408 ZNF112Q9UJU3 913 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 VWA5AO00534 786 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 IPO7O95373 1038 aaKnown RBP11.54□□□□□ -0.56
USP43-205ENST00000574408 BCRP11274 1271 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 MRPS9P82933 396 aaKnown RBP11.54□□□□□ -0.56
USP43-205ENST00000574408 DMTNQ08495 405 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 PRKG1Q13976 671 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 B3GNT9Q6UX72 402 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 TRIM59Q8IWR1 403 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 SLC35F6Q8N357 371 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 CRACR2AQ9BSW2 395 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 TRIM10Q9UDY6 481 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 GUCA1BQ9UMX6 200 aa11.54□□□□□ -0.56
USP43-205ENST00000574408 EPS15P42566 896 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 MAP3K9P80192 1104 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 GHRHRQ02643 423 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 PCNX4Q63HM2 1172 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 RNF207Q6ZRF8 634 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 RRAGAQ7L523 313 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 CACNA2D4Q7Z3S7 1137 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 KIAA1328Q86T90 577 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 PURBQ96QR8 312 aaKnown RBP11.53□□□□□ -0.56
USP43-205ENST00000574408 RMDN3Q96TC7 470 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 ST7Q9NRC1 585 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 RNF146Q9NTX7 359 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 TFR2Q9UP52 801 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 SAMM50Q9Y512 469 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 UBIAD1Q9Y5Z9 338 aa11.53□□□□□ -0.56
USP43-205ENST00000574408 NMT1P30419 496 aaKnown RBP11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms