RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TUBE1Q9UJT0 475 aa14.45□□□□□ -0.1
NPLOC4-213ENST00000573519 BACH1O14867 736 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 CYP3A4P08684 503 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 STAT5BP51692 787 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 ADAM17P78536 824 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 ADGRE1Q14246 886 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 CCDC85BQ15834 202 aaPredicted RBP14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 PRR16Q569H4 304 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 TAF2Q6P1X5 1199 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 RSPH3Q86UC2 560 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 MYOCDQ8IZQ8 938 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 MICALL1Q8N3F8 863 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 USP38Q8NB14 1042 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 ARNTL2Q8WYA1 636 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 SEPT8Q92599 483 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 TNPO1Q92973 898 aaKnown RBP14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 PCYT2Q99447 389 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 ZNF577Q9BSK1 485 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 TCEAL9Q9UHQ7 104 aa14.44□□□□□ -0.1
NPLOC4-213ENST00000573519 IGLV3-22A0A075B6J6 115 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 RFXAPO00287 272 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 IPO5O00410 1097 aaKnown RBP14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 ARHGEF15O94989 841 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 DEXIO95424 95 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 CCNE2O96020 404 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 AMHP03971 560 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 INSRRP14616 1297 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 SETQ01105 290 aaPredicted RBP14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 TAP1Q03518 808 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 PLCB4Q15147 1175 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 PLEKHG4Q58EX7 1191 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 PLPPR4Q7Z2D5 763 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 DNAJB3Q8WWF6 145 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 ZBTB10Q96DT7 871 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 OSBPL7Q9BZF2 842 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 FAM49AQ9H0Q0 323 aaPredicted RBP14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 SH3GLB2Q9NR46 395 aa14.43□□□□□ -0.1
NPLOC4-213ENST00000573519 POTEB3A0JP26 581 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 LCHNA4D1U4 455 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 RRN3P2A6NIE6 340 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 GJB5O95377 273 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 MARCH8Q5T0T0 291 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 FAM160B1Q5W0V3 765 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 MIS18BP1Q6P0N0 1132 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 POTEBQ6S5H4 581 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 TRAPPC12Q8WVT3 735 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 CRYGNQ8WXF5 182 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 RAD9AQ99638 391 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 IFIH1Q9BYX4 1025 aaKnown RBP14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 SLKQ9H2G2 1235 aaPredicted RBP14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 ZNF302Q9NR11 478 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 TBC1D22BQ9NU19 505 aa14.42□□□□□ -0.1
NPLOC4-213ENST00000573519 MBLAC1A4D2B0 266 aaPredicted RBP14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 UPP2O95045 317 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 ATG7O95352 703 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 CHRNA1P02708 482 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 GHRP10912 638 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 FAM26DQ5JW98 314 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 SWSAP1Q6NVH7 229 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 ABHD15Q6UXT9 468 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 TRMT1LQ7Z2T5 733 aaKnown RBP14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 CCDC60Q8IWA6 550 aaPredicted RBP14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 CKAP2LQ8IYA6 745 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 AIFM3Q96NN9 605 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 MTUS1Q9ULD2 1270 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 PCDHA4Q9UN74 947 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 SAMM50Q9Y512 469 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 TET1Q8NFU7 2136 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 PTPRSQ13332 1948 aa14.41□□□□□ -0.1
NPLOC4-213ENST00000573519 EPOPA6NHQ4 379 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 M0QZ92 97 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 DHX15O43143 795 aaKnown RBP14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 GTPBP6O43824 516 aaPredicted RBP14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 CDKL5O76039 1030 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 SLC26A2P50443 739 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 ANAPC15P60006 121 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 TMEM62Q0P6H9 643 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 SCRN1Q12765 414 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 PDXDC2PQ6P474 469 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 SPRED2Q7Z698 418 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 RPAINQ86UA6 219 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 TBCKQ8TEA7 893 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 APBB2Q92870 758 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 PRDM6Q9NQX0 595 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 TPCN1Q9ULQ1 816 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 CDY2AQ9Y6F7 541 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 CHD9Q3L8U1 2897 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 EYSQ5T1H1 3165 aa14.4□□□□□ -0.1
NPLOC4-213ENST00000573519 IGKV6D-21A0A0A0MT36 114 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 DTNBO60941 627 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 PSAPP07602 524 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 CIITAP33076 1130 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 AK2P54819 239 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 MRPS6P82932 125 aaKnown RBP14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 KRT76Q01546 638 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 MGAT3Q09327 533 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 LPIN1Q14693 890 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 ANKRD1Q15327 319 aa14.39□□□□□ -0.11
NPLOC4-213ENST00000573519 IER5Q5VY09 327 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms