RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 HEATR4Q86WZ0 1026 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 SIAH1Q8IUQ4 282 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 VWA5B2Q8N398 1253 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 CRACR2BQ8N4Y2 399 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 ANKRD52Q8NB46 1076 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 RHBDD1Q8TEB9 315 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 FNIP1Q8TF40 1166 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 SSH1Q8WYL5 1049 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 LRTOMTQ8WZ04 291 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 ERCC4Q92889 916 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 PHKBQ93100 1093 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 PPP1R14AQ96A00 147 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 ZC3H10Q96K80 434 aaKnown RBP5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 DHRS1Q96LJ7 313 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 MOGAT1Q96PD6 335 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 TSGA13Q96PP4 275 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 OSMRQ99650 979 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 DESI2Q9BSY9 194 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 B3GNT5Q9BYG0 378 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 GSX2Q9BZM3 304 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 ZNF576Q9H609 170 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 GRPEL1Q9HAV7 217 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 EPB41L4AQ9HCS5 686 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 CABP5Q9NP86 173 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 POGKQ9P215 609 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 SUSD2Q9UGT4 822 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 C19orf53Q9UNZ5 99 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 KCNH4Q9UQ05 1017 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 SIK3Q9Y2K2 1263 aa5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 MTF2Q9Y483 593 aaPredicted RBP5.67□□□□□ -1.5
TOPBP1-210ENST00000572787 SYNJ2BP-COX16A0A087WUM0 186 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 LOC102724428A0A0B4J2F2 783 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 C17orf113A0A1B0GUU1 675 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 CAPN8A6NHC0 703 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 FAM25EA8MYX2 175 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 KPNA5O15131 536 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 B3GALT2O43825 422 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 TADA3O75528 432 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 GLRX3O76003 335 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 URI1O94763 535 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 TPPPO94811 219 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 UBXN7O94888 489 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 CRTAMO95727 393 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 MT-ND3P03897 115 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 CCDC175P0C221 793 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 VEGFAP15692 232 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 RPS2P15880 293 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 ITGA6P23229 1130 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 ATP5DP30049 168 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 MC4RP32245 332 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 ADD1P35611 737 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 PRPHP41219 470 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 SIK1P57059 783 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 SCAND1P57086 179 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 RNASE9P60153 205 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 MAP2K1Q02750 393 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 UBXN1Q04323 297 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 FOXO1Q12778 655 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 CUL4AQ13619 759 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 TAF5Q15542 800 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 ASIC2Q16515 512 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 SPRED3Q2MJR0 410 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 SETMARQ53H47 684 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 FBXO47Q5MNV8 452 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 TMEM214Q6NUQ4 689 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 C16orf87Q6PH81 154 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 RAPH1Q70E73 1250 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 CCDC91Q7Z6B0 441 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 GALNT15Q8N3T1 639 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 TSPYL6Q8N831 410 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 TOR1AIP2Q8NFQ8 470 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 CHTF18Q8WVB6 975 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 RUFY2Q8WXA3 655 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 RFFLQ8WZ73 363 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 MVB12AQ96EY5 273 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 TMEM169Q96HH4 297 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 C7orf26Q96N11 449 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 NLRP3Q96P20 1036 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 ZSCAN10Q96SZ4 725 aaPredicted RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 ZKSCAN3Q9BRR0 538 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 PI4K2AQ9BTU6 479 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 EMILIN2Q9BXX0 1053 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 BTBD1Q9H0C5 482 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 MAGEH1Q9H213 219 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 VPS33BQ9H267 617 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 GHITMQ9H3K2 345 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 XAB2Q9HCS7 855 aaKnown RBP5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 ZDHHC3Q9NYG2 299 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 GRHPRQ9UBQ7 328 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 CTNNA3Q9UI47 895 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 DAGLAQ9Y4D2 1042 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 USP19O94966 1318 aa5.66□□□□□ -1.5
TOPBP1-210ENST00000572787 A0A096LPE4 126 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 A0A1W2PPZ6 126 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 CCDC66A2RUB6 948 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 FAM86C2PA6NEL3 165 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 ERICH4A6NGS2 130 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 TISP43B9A030 160 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 B9A039 149 aa5.65□□□□□ -1.5
TOPBP1-210ENST00000572787 PI4K2BG5E9Z4 385 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms