RNA–Protein interactions for RNA: ENST00000572579.1

CHD3-214, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-214ENST00000572579 INSRRP14616 1297 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 METAP2P50579 478 aaKnown RBP eCLIP20.7■□□□□ 0.9
CHD3-214ENST00000572579 ACTR2P61160 394 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 NTRK3Q16288 839 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 JAKMIP3Q5VZ66 844 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 DNAJB3Q8WWF6 145 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 GLG1Q92896 1179 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 CCDC136Q96JN2 1154 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 NECAB3Q96P71 396 aaPredicted RBP20.7■□□□□ 0.9
CHD3-214ENST00000572579 UIMC1Q96RL1 719 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 SMARCAD1Q9H4L7 1026 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 SLC9A2Q9UBY0 812 aa20.7■□□□□ 0.9
CHD3-214ENST00000572579 DHX15O43143 795 aaKnown RBP20.69■□□□□ 0.9
CHD3-214ENST00000572579 FOSP01100 380 aaPredicted RBP20.69■□□□□ 0.9
CHD3-214ENST00000572579 AMHP03971 560 aa20.69■□□□□ 0.9
CHD3-214ENST00000572579 GHRP10912 638 aa20.69■□□□□ 0.9
CHD3-214ENST00000572579 RPS6KB1P23443 525 aa20.69■□□□□ 0.9
CHD3-214ENST00000572579 KCNQ1P51787 676 aa20.69■□□□□ 0.9
CHD3-214ENST00000572579 LPIN1Q14693 890 aa20.69■□□□□ 0.9
CHD3-214ENST00000572579 PLCB4Q15147 1175 aa20.69■□□□□ 0.9
CHD3-214ENST00000572579 TRAPPC12Q8WVT3 735 aa20.69■□□□□ 0.9
CHD3-214ENST00000572579 TGS1Q96RS0 853 aaKnown RBP20.69■□□□□ 0.9
CHD3-214ENST00000572579 NAP1L2Q9ULW6 460 aaPredicted RBP20.69■□□□□ 0.9
CHD3-214ENST00000572579 INSL6Q9Y581 213 aa20.69■□□□□ 0.9
CHD3-214ENST00000572579 NFASCO94856 1347 aa20.69■□□□□ 0.9
CHD3-214ENST00000572579 IGLV3-22A0A075B6J6 115 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 GTPBP6O43824 516 aaPredicted RBP20.68■□□□□ 0.9
CHD3-214ENST00000572579 SCG2P13521 617 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 IGBP1P78318 339 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 TAF2Q6P1X5 1199 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 TEX2Q8IWB9 1127 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 ADAMTS19Q8TE59 1207 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 PHKBQ93100 1093 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 IFIH1Q9BYX4 1025 aaKnown RBP20.68■□□□□ 0.9
CHD3-214ENST00000572579 ZMYND12Q9H0C1 365 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 AGO3Q9H9G7 860 aaKnown RBP20.68■□□□□ 0.9
CHD3-214ENST00000572579 TUBE1Q9UJT0 475 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 NID2Q14112 1375 aa20.68■□□□□ 0.9
CHD3-214ENST00000572579 IGKV6D-21A0A0A0MT36 114 aa20.67■□□□□ 0.9
CHD3-214ENST00000572579 hCG_1984214I3L0E3 225 aa20.67■□□□□ 0.9
CHD3-214ENST00000572579 PRPF3O43395 683 aaKnown RBP20.67■□□□□ 0.9
CHD3-214ENST00000572579 UPP2O95045 317 aa20.67■□□□□ 0.9
CHD3-214ENST00000572579 LINC00271P0C7V0 271 aa20.67■□□□□ 0.9
CHD3-214ENST00000572579 AP3B2Q13367 1082 aa20.67■□□□□ 0.9
CHD3-214ENST00000572579 BLOC1S2Q6QNY1 142 aa20.67■□□□□ 0.9
CHD3-214ENST00000572579 ZNF713Q8N859 430 aaPredicted RBP20.67■□□□□ 0.9
CHD3-214ENST00000572579 ENPP3O14638 875 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 CYP3A4P08684 503 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 ATP4AP20648 1035 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 PDIA3P30101 505 aaKnown RBP20.66■□□□□ 0.9
CHD3-214ENST00000572579 EVCP57679 992 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 SKIV2LQ15477 1246 aaKnown RBP20.66■□□□□ 0.9
CHD3-214ENST00000572579 FBXO47Q5MNV8 452 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 ABHD15Q6UXT9 468 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 PLPPR4Q7Z2D5 763 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 RTN4RL1Q86UN2 441 aaPredicted RBP20.66■□□□□ 0.9
CHD3-214ENST00000572579 RASGRP4Q8TDF6 673 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 LINC01599Q8WXQ3 324 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 CDY2AQ9Y6F7 541 aa20.66■□□□□ 0.9
CHD3-214ENST00000572579 ESYT2A0FGR8 921 aa20.65■□□□□ 0.9
CHD3-214ENST00000572579 TNFRSF10AO00220 468 aa20.65■□□□□ 0.9
CHD3-214ENST00000572579 STAT5BP51692 787 aa20.65■□□□□ 0.9
CHD3-214ENST00000572579 FGD1P98174 961 aa20.65■□□□□ 0.9
CHD3-214ENST00000572579 TOB2Q14106 344 aaPredicted RBP20.65■□□□□ 0.9
CHD3-214ENST00000572579 NIPA1Q7RTP0 329 aa20.65■□□□□ 0.9
CHD3-214ENST00000572579 SDF4Q9BRK5 362 aa20.65■□□□□ 0.9
CHD3-214ENST00000572579 FAM49AQ9H0Q0 323 aaPredicted RBP20.65■□□□□ 0.9
CHD3-214ENST00000572579 NCOA5Q9HCD5 579 aaKnown RBP20.65■□□□□ 0.9
CHD3-214ENST00000572579 ZBTB42B2RXF5 422 aa20.64■□□□□ 0.89
CHD3-214ENST00000572579 DDX39AO00148 427 aaKnown RBP20.64■□□□□ 0.89
CHD3-214ENST00000572579 TMEM62Q0P6H9 643 aa20.64■□□□□ 0.89
CHD3-214ENST00000572579 EPC2Q52LR7 807 aa20.64■□□□□ 0.89
CHD3-214ENST00000572579 PLA2G4DQ86XP0 818 aa20.64■□□□□ 0.89
CHD3-214ENST00000572579 CRIPAKQ8N1N5 446 aa20.64■□□□□ 0.89
CHD3-214ENST00000572579 APBB2Q92870 758 aa20.64■□□□□ 0.89
CHD3-214ENST00000572579 UHRF1Q96T88 793 aaPredicted RBP20.64■□□□□ 0.89
CHD3-214ENST00000572579 LARP6Q9BRS8 491 aaKnown RBP20.64■□□□□ 0.89
CHD3-214ENST00000572579 RC3H2Q9HBD1 1191 aaKnown RBP20.64■□□□□ 0.89
CHD3-214ENST00000572579 LMCD1Q9NZU5 365 aa20.64■□□□□ 0.89
CHD3-214ENST00000572579 PCDHA2Q9Y5H9 948 aa20.64■□□□□ 0.89
CHD3-214ENST00000572579 CCDC196A0A1B0GTZ2 297 aa20.63■□□□□ 0.89
CHD3-214ENST00000572579 RRN3P2A6NIE6 340 aa20.63■□□□□ 0.89
CHD3-214ENST00000572579 CCT2P78371 535 aaKnown RBP20.63■□□□□ 0.89
CHD3-214ENST00000572579 MRPS6P82932 125 aaKnown RBP20.63■□□□□ 0.89
CHD3-214ENST00000572579 CCDC60Q8IWA6 550 aaPredicted RBP20.63■□□□□ 0.89
CHD3-214ENST00000572579 LENG9Q96B70 501 aa20.63■□□□□ 0.89
CHD3-214ENST00000572579 YME1L1Q96TA2 773 aa20.63■□□□□ 0.89
CHD3-214ENST00000572579 GLT8D2Q9H1C3 349 aa20.63■□□□□ 0.89
CHD3-214ENST00000572579 AZI2Q9H6S1 392 aa20.63■□□□□ 0.89
CHD3-214ENST00000572579 ZSWIM6Q9HCJ5 1215 aa20.63■□□□□ 0.89
CHD3-214ENST00000572579 NCOR1O75376 2440 aa20.63■□□□□ 0.89
CHD3-214ENST00000572579 MICAL3Q7RTP6 2002 aa20.62■□□□□ 0.89
CHD3-214ENST00000572579 POTEB3A0JP26 581 aa20.62■□□□□ 0.89
CHD3-214ENST00000572579 CD52P31358 61 aa20.62■□□□□ 0.89
CHD3-214ENST00000572579 ZNF76P36508 570 aa20.62■□□□□ 0.89
CHD3-214ENST00000572579 POTEBQ6S5H4 581 aa20.62■□□□□ 0.89
CHD3-214ENST00000572579 FBXO22Q8NEZ5 403 aa20.62■□□□□ 0.89
CHD3-214ENST00000572579 TSPYL2Q9H2G4 693 aaPredicted RBP20.62■□□□□ 0.89
CHD3-214ENST00000572579 CDHR5Q9HBB8 845 aa20.62■□□□□ 0.89
CHD3-214ENST00000572579 TRPC6Q9Y210 931 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms