RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 MYBP10242 640 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 SLC18A3Q16572 532 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 MICALCLQ6ZW33 695 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 TAF1P21675 1872 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 CASP4P49662 377 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 CASP5P51878 434 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 IFI16Q16666 785 aaKnown RBP16.75■□□□□ 0.27
USP43-202ENST00000570475 ASPRV1Q53RT3 343 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 LRRC55Q6ZSA7 311 aa16.75■□□□□ 0.27
USP43-202ENST00000570475 SART1O43290 800 aaKnown RBP16.74■□□□□ 0.27
USP43-202ENST00000570475 QRICH1Q2TAL8 776 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 SLFN13Q68D06 897 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 GLYCTKQ8IVS8 523 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 ADAMTS7Q9UKP4 1686 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 COL18A1P39060 1754 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 M0R2N6 131 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 FGGP02679 453 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 ITGA4P13612 1032 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 IFNAR2P48551 515 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 GBP6Q6ZN66 633 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 DYDC1Q8WWB3 177 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 DBNDD1Q9H9R9 158 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 DAGLAQ9Y4D2 1042 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 LAMB4A4D0S4 1761 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 AFPP02771 609 aaKnown RBP16.74■□□□□ 0.27
USP43-202ENST00000570475 KCNA1Q09470 495 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 CCDC174Q6PII3 467 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 TRIM51Q9BSJ1 452 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 ANO3Q9BYT9 981 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 TCEAL9Q9UHQ7 104 aa16.74■□□□□ 0.27
USP43-202ENST00000570475 TTI1O43156 1089 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 MED24O75448 989 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 TRIM49P0CI25 452 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 TRIM49CP0CI26 452 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 LSP1P33241 339 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 SSR1P43307 286 aaKnown RBP16.73■□□□□ 0.27
USP43-202ENST00000570475 PLTPP55058 493 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 MGARPQ8TDB4 240 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 SCFD1Q8WVM8 642 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 CTNNBL1Q8WYA6 563 aaPredicted RBP16.73■□□□□ 0.27
USP43-202ENST00000570475 NUCKS1Q9H1E3 243 aaKnown RBP16.73■□□□□ 0.27
USP43-202ENST00000570475 PCIF1Q9H4Z3 704 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 FBXL5Q9UKA1 691 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 THRAP3Q9Y2W1 955 aaKnown RBP16.73■□□□□ 0.27
USP43-202ENST00000570475 TNFAIP3P21580 790 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 STAT1P42224 750 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 HDLBPQ00341 1268 aaKnown RBP16.73■□□□□ 0.27
USP43-202ENST00000570475 ADCY1Q08828 1119 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 PTPN22Q9Y2R2 807 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 UTP11Q9Y3A2 253 aaKnown RBP16.73■□□□□ 0.27
USP43-202ENST00000570475 UCHL3P15374 230 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 FIGNQ5HY92 759 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 NUP188Q5SRE5 1749 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 MEX3CQ5U5Q3 659 aaKnown RBP16.73■□□□□ 0.27
USP43-202ENST00000570475 PHLDB2Q86SQ0 1253 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 RNF10Q8N5U6 811 aaKnown RBP16.73■□□□□ 0.27
USP43-202ENST00000570475 ANKS1AQ92625 1134 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 IQCDQ96DY2 449 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 MTMR9Q96QG7 549 aa16.73■□□□□ 0.27
USP43-202ENST00000570475 GRID2IPA4D2P6 1211 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 ZNF233A6NK53 670 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 PGRMC1O00264 195 aaKnown RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 ZBTB5O15062 677 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 NMT1P30419 496 aaKnown RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 PSMD2Q13200 908 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 NAB2Q15742 525 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 CDC37Q16543 378 aaPredicted RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 ZC2HC1CQ53FD0 456 aaPredicted RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 ZNF746Q6NUN9 644 aaPredicted RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 ZNF571Q7Z3V5 609 aaPredicted RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 CYP2W1Q8TAV3 490 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 JPH2Q9BR39 696 aaPredicted RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 CTTNBP2NLQ9P2B4 639 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 LMTK3Q96Q04 1460 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 SERPINB2P05120 415 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 RPL13P26373 211 aaKnown RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 ZNF543Q08ER8 600 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 SF3B2Q13435 895 aaKnown RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 LRRC45Q96CN5 670 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 DNAJC17Q9NVM6 304 aaKnown RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 AMFRQ9UKV5 643 aa16.72■□□□□ 0.27
USP43-202ENST00000570475 NOC2LQ9Y3T9 749 aaKnown RBP16.72■□□□□ 0.27
USP43-202ENST00000570475 SSU72P8A0A1W2PR75 194 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 KIF4AO95239 1232 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 GNA14O95837 355 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.27
USP43-202ENST00000570475 NFIAQ12857 509 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 HS2ST1Q7LGA3 356 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 CCDC26Q8TAB7 109 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 HAS1Q92839 578 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 RBM17Q96I25 401 aaKnown RBP16.71■□□□□ 0.27
USP43-202ENST00000570475 REEP2Q9BRK0 252 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 TMOD4Q9NZQ9 345 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 CALUO43852 315 aaPredicted RBP16.71■□□□□ 0.27
USP43-202ENST00000570475 EXOC3O60645 756 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 CYP11B2P19099 503 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 GJC1P36383 396 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 VPS41P49754 854 aa16.71■□□□□ 0.27
USP43-202ENST00000570475 MAGOHP61326 146 aaKnown RBP16.71■□□□□ 0.27
USP43-202ENST00000570475 PDIA5Q14554 519 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms