RNA–Protein interactions for RNA: ENST00000569857.5

PKM-224, Transcript of pyruvate kinase M1/2, humanhuman

TSL 5

Gene PKM, Length 1,355 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-224ENST00000569857 CLIC4Q9Y696 253 aa13.96□□□□□ -0.17
PKM-224ENST00000569857 HAS3O00219 553 aa13.96□□□□□ -0.18
PKM-224ENST00000569857 TLR3O15455 904 aaKnown RBP13.96□□□□□ -0.18
PKM-224ENST00000569857 LGR5O75473 907 aa13.96□□□□□ -0.18
PKM-224ENST00000569857 F13A1P00488 732 aa13.96□□□□□ -0.18
PKM-224ENST00000569857 SMIM10L2AP0DMW4 78 aa13.96□□□□□ -0.18
PKM-224ENST00000569857 SMIM10L2BP0DMW5 78 aa13.96□□□□□ -0.18
PKM-224ENST00000569857 SFNP31947 248 aa13.96□□□□□ -0.18
PKM-224ENST00000569857 CDK7P50613 346 aa13.96□□□□□ -0.18
PKM-224ENST00000569857 ZNF200P98182 395 aaPredicted RBP13.96□□□□□ -0.18
PKM-224ENST00000569857 SF3A1Q15459 793 aaKnown RBP13.96□□□□□ -0.18
PKM-224ENST00000569857 C4orf32Q8N8J7 132 aa13.96□□□□□ -0.18
PKM-224ENST00000569857 SETD4Q9NVD3 440 aa13.96□□□□□ -0.18
PKM-224ENST00000569857 EMSYQ7Z589 1322 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 POTEMA6NI47 508 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 B4GALT4O60513 344 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 CYP4A11Q02928 519 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 PPP2R5CQ13362 524 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 ORC2Q13416 577 aaPredicted RBP13.95□□□□□ -0.18
PKM-224ENST00000569857 CTTNQ14247 550 aaKnown RBP13.95□□□□□ -0.18
PKM-224ENST00000569857 SNX17Q15036 470 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 PLCB4Q15147 1175 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 EPHA7Q15375 998 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 PTGISQ16647 500 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 UGCGQ16739 394 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 TMEM266Q2M3C6 531 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 GDF6Q6KF10 455 aaPredicted RBP13.95□□□□□ -0.18
PKM-224ENST00000569857 NFRKBQ6P4R8 1299 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 PLPPR4Q7Z2D5 763 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 SH3RF1Q7Z6J0 888 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 SLC43A3Q8NBI5 491 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 DYDC2Q96IM9 177 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 TMEM39AQ9NV64 488 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 RGL1Q9NZL6 768 aa13.95□□□□□ -0.18
PKM-224ENST00000569857 RBM19Q9Y4C8 960 aaKnown RBP13.95□□□□□ -0.18
PKM-224ENST00000569857 MROH7Q68CQ1 1323 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 A0A087WWV3 80 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 IGKV6D-21A0A0A0MT36 114 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 POTEB3A0JP26 581 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 C17orf102A2RUQ5 167 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 CYP2C9P11712 490 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 PDIA4P13667 645 aaKnown RBP13.94□□□□□ -0.18
PKM-224ENST00000569857 INSRRP14616 1297 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 ATP4AP20648 1035 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 FAAP100Q0VG06 881 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 PPFIA1Q13136 1202 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 HIC1Q14526 733 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 C1orf53Q5VUE5 145 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 POTEBQ6S5H4 581 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 B3GNT9Q6UX72 402 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 DTHD1Q6ZMT9 781 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 TPH2Q8IWU9 490 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 FAM126BQ8IXS8 530 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 TRAPPC12Q8WVT3 735 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 ZBTB10Q96DT7 871 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 USP28Q96RU2 1077 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 PRKAG2Q9UGJ0 569 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 GTF2IRD1Q9UHL9 959 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 NR2E3Q9Y5X4 410 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 BRCA2P51587 3418 aa13.94□□□□□ -0.18
PKM-224ENST00000569857 SCN10AQ9Y5Y9 1956 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 ALPK3Q96L96 1907 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 VWA3AA6NCI4 1184 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 DDX11L8A8MPP1 907 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 ZNF862O60290 1169 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 CLTBP09497 229 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 MARCKSP29966 332 aaPredicted RBP13.93□□□□□ -0.18
PKM-224ENST00000569857 ATP2C1P98194 919 aaPredicted RBP13.93□□□□□ -0.18
PKM-224ENST00000569857 SPIRE1Q08AE8 756 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 IL17AQ16552 155 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 ANKRD33Q7Z3H0 272 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 RDM1Q8NG50 284 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 AFAP1L1Q8TED9 768 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 ATP6V0A1Q93050 837 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 ZNF396Q96N95 335 aaPredicted RBP13.93□□□□□ -0.18
PKM-224ENST00000569857 EIF2AK1Q9BQI3 630 aaKnown RBP13.93□□□□□ -0.18
PKM-224ENST00000569857 SH2D3AQ9BRG2 576 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 PPP1R12CQ9BZL4 782 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 LRWD1Q9UFC0 647 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 CEP131Q9UPN4 1083 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 ZDHHC9Q9Y397 364 aa13.93□□□□□ -0.18
PKM-224ENST00000569857 MAFBQ9Y5Q3 323 aaPredicted RBP13.93□□□□□ -0.18
PKM-224ENST00000569857 TMEM150BA6NC51 233 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 PP2D1A8MPX8 630 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 LAD1O00515 517 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 TREHO43280 583 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 BRD1O95696 1058 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 P4HBP07237 508 aaKnown RBP13.92□□□□□ -0.18
PKM-224ENST00000569857 CDC25AP30304 524 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 QARSP47897 775 aaKnown RBP13.92□□□□□ -0.18
PKM-224ENST00000569857 PSMC5P62195 406 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 PRKCEQ02156 737 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 PTPN11Q06124 597 aaPredicted RBP13.92□□□□□ -0.18
PKM-224ENST00000569857 ZRSR1Q15695 479 aaKnown RBP13.92□□□□□ -0.18
PKM-224ENST00000569857 GRIK4Q16099 956 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 ATP8B4Q8TF62 1192 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 LMBR1Q8WVP7 490 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 CHAMP1Q96JM3 812 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 TOX2Q96NM4 488 aa13.92□□□□□ -0.18
PKM-224ENST00000569857 SEZ6LQ9BYH1 1024 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms