RNA–Protein interactions for RNA: ENST00000569374.1

CCDC113-205, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-205ENST00000569374 NOP56O00567 594 aaKnown RBP9.55□□□□□ -0.88
CCDC113-205ENST00000569374 USP11P51784 963 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 NEXNQ0ZGT2 675 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 POMZP3Q6PJE2 187 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 USP50Q70EL3 339 aaPredicted RBP9.55□□□□□ -0.88
CCDC113-205ENST00000569374 KRT26Q7Z3Y9 468 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 C2CD4AQ8NCU7 369 aaPredicted RBP9.55□□□□□ -0.88
CCDC113-205ENST00000569374 LRRN4CLQ8ND94 238 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 LINS1Q8NG48 757 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 FAM105AQ9NUU6 356 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 GGA3Q9NZ52 723 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 WHRNQ9P202 907 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 CEP131Q9UPN4 1083 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 TNNQ9UQP3 1299 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 ZNF609O15014 1411 aa9.55□□□□□ -0.88
CCDC113-205ENST00000569374 C9IYK1 514 aa9.54□□□□□ -0.88
CCDC113-205ENST00000569374 CELF2O95319 508 aaKnown RBP9.54□□□□□ -0.88
CCDC113-205ENST00000569374 CSF1RP07333 972 aa9.54□□□□□ -0.88
CCDC113-205ENST00000569374 NBPF7P0C2Y1 421 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-205ENST00000569374 CCT4P50991 539 aaKnown RBP9.54□□□□□ -0.88
CCDC113-205ENST00000569374 AXDND1Q5T1B0 1012 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-205ENST00000569374 PRAMEF18Q5VWM3 479 aa9.54□□□□□ -0.88
CCDC113-205ENST00000569374 SLC4A10Q6U841 1118 aa9.54□□□□□ -0.88
CCDC113-205ENST00000569374 SVOPQ8N4V2 548 aa9.54□□□□□ -0.88
CCDC113-205ENST00000569374 SSH1Q8WYL5 1049 aa9.54□□□□□ -0.88
CCDC113-205ENST00000569374 PLA2G12BQ9BX93 195 aa9.54□□□□□ -0.88
CCDC113-205ENST00000569374 PUS3Q9BZE2 481 aaKnown RBP9.54□□□□□ -0.88
CCDC113-205ENST00000569374 KLHL25Q9H0H3 589 aa9.54□□□□□ -0.88
CCDC113-205ENST00000569374 TMX4Q9H1E5 349 aaPredicted RBP9.54□□□□□ -0.88
CCDC113-205ENST00000569374 CHMP4BQ9H444 224 aaKnown RBP9.54□□□□□ -0.88
CCDC113-205ENST00000569374 SSC5DA1L4H1 1573 aa9.54□□□□□ -0.88
CCDC113-205ENST00000569374 WDR33Q9C0J8 1336 aaKnown RBP9.54□□□□□ -0.88
CCDC113-205ENST00000569374 LAMB1P07942 1786 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 AKAP11Q9UKA4 1901 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 TRBV23-1A0A0A0MS06 115 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 PLD2O14939 933 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 GAS2O43903 313 aaKnown RBP9.53□□□□□ -0.88
CCDC113-205ENST00000569374 SASH1O94885 1247 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 CNGA1P29973 690 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 ETV3P41162 512 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 PPP2R2AP63151 447 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 CHRNDQ07001 517 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 TNIP1Q15025 636 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 FNDC3BQ53EP0 1204 aaKnown RBP9.53□□□□□ -0.88
CCDC113-205ENST00000569374 DACT2Q5SW24 774 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 LMBR1LQ6UX01 489 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 MOB2Q70IA6 237 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 CERS5Q8N5B7 392 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 ANKRD44Q8N8A2 993 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 BVESQ8NE79 360 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 KLHDC4Q8TBB5 520 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 VPS33BQ9H267 617 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 NCOA5Q9HCD5 579 aaKnown RBP9.53□□□□□ -0.88
CCDC113-205ENST00000569374 ARHGEF4Q9NR80 690 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 BSDC1Q9NW68 430 aaPredicted RBP9.53□□□□□ -0.88
CCDC113-205ENST00000569374 SUSD2Q9UGT4 822 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 PGAP2Q9UHJ9 254 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 FZD1Q9UP38 647 aa9.53□□□□□ -0.88
CCDC113-205ENST00000569374 MRPS23Q9Y3D9 190 aaKnown RBP9.53□□□□□ -0.88
CCDC113-205ENST00000569374 COL1A1P02452 1464 aaPredicted RBP9.53□□□□□ -0.88
CCDC113-205ENST00000569374 DNAJC25-GNG10A0A024R161 153 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 F8W735 103 aaPredicted RBP9.52□□□□□ -0.89
CCDC113-205ENST00000569374 GRM8O00222 908 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 CBFA2T2O43439 604 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 FGFR1P11362 822 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 ITGA4P13612 1032 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 GMPRP36959 345 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 SUMO1P63165 101 aaKnown RBP9.52□□□□□ -0.89
CCDC113-205ENST00000569374 AMPD3Q01432 767 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 PABPC4Q13310 644 aaKnown RBP eCLIP9.52□□□□□ -0.89
CCDC113-205ENST00000569374 NBPF9Q3BBW0 867 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 TM4SF20Q53R12 229 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 ANGEL2Q5VTE6 544 aaKnown RBP9.52□□□□□ -0.89
CCDC113-205ENST00000569374 LINC00114Q6XXX2 140 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 SAPCD2Q86UD0 394 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 C7orf61Q8IZ16 206 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 CHAC2Q8WUX2 184 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 CAPNS2Q96L46 248 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 CDC5LQ99459 802 aaKnown RBP9.52□□□□□ -0.89
CCDC113-205ENST00000569374 EYA3Q99504 573 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 ASPNQ9BXN1 380 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 AKTIPQ9H8T0 292 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 ZNF804BA4D1E1 1349 aa9.52□□□□□ -0.89
CCDC113-205ENST00000569374 ITGAVP06756 1048 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 HSPA8P11142 646 aaKnown RBP9.51□□□□□ -0.89
CCDC113-205ENST00000569374 CD247P20963 164 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 L1CAMP32004 1257 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 RARSP54136 660 aaKnown RBP9.51□□□□□ -0.89
CCDC113-205ENST00000569374 DEFB115Q30KQ5 88 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 CT47A1Q5JQC4 288 aaPredicted RBP9.51□□□□□ -0.89
CCDC113-205ENST00000569374 NBPF12Q5TAG4 269 aaPredicted RBP9.51□□□□□ -0.89
CCDC113-205ENST00000569374 C20orf194Q5TEA3 1177 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 DCAF15Q66K64 600 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 LETMD1Q6P1Q0 360 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 UBE3DQ7Z6J8 389 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 ZNF227Q86WZ6 799 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 WHAMMQ8TF30 809 aa9.51□□□□□ -0.89
CCDC113-205ENST00000569374 KISS1RQ969F8 398 aaPredicted RBP9.51□□□□□ -0.89
CCDC113-205ENST00000569374 RCC1LQ96I51 464 aaKnown RBP9.51□□□□□ -0.89
CCDC113-205ENST00000569374 FGD4Q96M96 766 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms