RNA–Protein interactions for RNA: ENST00000568569.1

GTF3C1-209, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-209ENST00000568569 FTHL17Q9BXU8 183 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 ERAP1Q9NZ08 941 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 CLEC1BQ9P126 229 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 CDY2AQ9Y6F7 541 aa13.61□□□□□ -0.23
GTF3C1-209ENST00000568569 MBLAC1A4D2B0 266 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 DNAJB1P25685 340 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 MARK3P27448 753 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 RRP1P56182 461 aaKnown RBP13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 ZXDAP98168 799 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 TRDNQ13061 729 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 CBX2Q14781 532 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 ADGRD2Q7Z7M1 963 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 NLRX1Q86UT6 975 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 FBXL6Q8N531 539 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 KLHL23Q8NBE8 558 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 SPPL3Q8TCT6 385 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 LINC01599Q8WXQ3 324 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 CUL5Q93034 780 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 OSBPL3Q9H4L5 887 aa13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 AGO3Q9H9G7 860 aaKnown RBP13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 USP15Q9Y4E8 981 aaPredicted RBP13.6□□□□□ -0.23
GTF3C1-209ENST00000568569 ERICH2A1L162 156 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 CD52P31358 61 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 NRIP1P48552 1158 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 MRPS6P82932 125 aaKnown RBP13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 TCF15Q12870 199 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 IER5Q5VY09 327 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 SMARCC2Q8TAQ2 1214 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 POF1BQ8WVV4 589 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 SEPT1Q8WYJ6 367 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 GLG1Q92896 1179 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 GPRASP2Q96D09 838 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 CDHR1Q96JP9 859 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 PHF7Q9BWX1 381 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 BARX2Q9UMQ3 279 aaPredicted RBP13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 SQORQ9Y6N5 450 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 TTC3P53804 2025 aa13.59□□□□□ -0.23
GTF3C1-209ENST00000568569 MYO15AQ9UKN7 3530 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 FSD2A1L4K1 749 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 PIK3CDO00329 1044 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 IFIT3O14879 490 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 GLP2RO95838 553 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 STAG3L1P0CL83 205 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 KCNA2P16389 499 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 SIGLEC14Q08ET2 396 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 TROAPQ12815 778 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 PAN2Q504Q3 1202 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 MARCH8Q5T0T0 291 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 USP17L6PQ6QN14 398 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 RBM23Q86U06 439 aaKnown RBP13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 PLEKHM2Q8IWE5 1019 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 CRIPAKQ8N1N5 446 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 IRF2BPLQ9H1B7 796 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 SMARCAD1Q9H4L7 1026 aa13.58□□□□□ -0.24
GTF3C1-209ENST00000568569 ATG2AQ2TAZ0 1938 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 M0QZ92 97 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 MEIS2O14770 477 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 SCG2P13521 617 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 IGBP1P78318 339 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 SART3Q15020 963 aaKnown RBP13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 B4GALNT3Q6L9W6 998 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 CHD1LQ86WJ1 897 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 SMC5Q8IY18 1101 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 PIBF1Q8WXW3 757 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 RPGRIP1Q96KN7 1286 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 FAM49AQ9H0Q0 323 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 TLE6Q9H808 572 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 TRPV2Q9Y5S1 764 aa13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 ZFHX2Q9C0A1 2572 aaPredicted RBP13.57□□□□□ -0.24
GTF3C1-209ENST00000568569 PTPRZ1P23471 2315 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 GSTTP1A0A1W2PQM5 241 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 RRN3P2A6NIE6 340 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 GFRA3O60609 400 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 ATP9AO75110 1047 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 ATF7P17544 494 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 UBE3AQ05086 875 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 PAK2Q13177 524 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 WTAPQ15007 396 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 CATIPQ7Z7H3 387 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 RTN4RL1Q86UN2 441 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 MICAL1Q8TDZ2 1067 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 SUSD6Q92537 303 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 TNPO1Q92973 898 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 RRP36Q96EU6 259 aaKnown RBP13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 CDCA3Q99618 268 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 SENP2Q9HC62 589 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 PADI3Q9ULW8 664 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 PCDHGC5Q9Y5F6 944 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 U3KPZ7 1027 aaPredicted RBP13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 IGSF9BQ9UPX0 1349 aa13.56□□□□□ -0.24
GTF3C1-209ENST00000568569 BAZ2BQ9UIF8 2168 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 INSRRP14616 1297 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 ITGB5P18084 799 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 VCPP55072 806 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 MTMR1Q13613 665 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 ATP8B4Q8TF62 1192 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 ZBTB10Q96DT7 871 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 ASIC4Q96FT7 647 aa13.55□□□□□ -0.24
GTF3C1-209ENST00000568569 NEK1Q96PY6 1258 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms