RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 KIF18BQ86Y91 864 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 NXPE1Q8N323 547 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 TP53I13Q8NBR0 393 aaPredicted RBP5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 BOCQ9BWV1 1114 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 RIC8BQ9NVN3 520 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 BTBD7Q9P203 1132 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 MAPRE3Q9UPY8 281 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 FAN1Q9Y2M0 1017 aa5.63□□□□□ -1.51
HERPUD1-212ENST00000567944 ATP2A2P16615 1042 aaKnown RBP5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 POU3F3P20264 500 aaPredicted RBP5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 FLT3P36888 993 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 STAT3P40763 770 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 IRF9Q00978 393 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 CAP1Q01518 475 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 SMAD4Q13485 552 aaKnown RBP5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 PKN1Q16512 942 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 ARHGAP44Q17R89 818 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 PRR31Q5SQ13 230 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 CATSPEREQ5SY80 951 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 TMC5Q6UXY8 1006 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 SAPCD2Q86UD0 394 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 PPM1KQ8N3J5 372 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 DTX3Q8N9I9 347 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 YIPF4Q9BSR8 244 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 IRF2BPLQ9H1B7 796 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 NGRNQ9NPE2 291 aaKnown RBP5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 H2AFY2Q9P0M6 372 aaPredicted RBP5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 PMF1-BGLAPU3KQ54 211 aa5.62□□□□□ -1.51
HERPUD1-212ENST00000567944 ZNF839A8K0R7 811 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 MPIG6BO95866 241 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 GJA4P35212 333 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 PFKPQ01813 784 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 ZNF385BQ569K4 471 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 PHF19Q5T6S3 580 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 STRA8Q7Z7C7 330 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 ADGRG2Q8IZP9 1017 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 UBR7Q8N806 425 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 KYQ8NBH2 561 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 ZNF526Q8TF50 670 aaPredicted RBP5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 ZBTB8AQ96BR9 441 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 FAM126AQ9BYI3 521 aaPredicted RBP5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 CABP5Q9NP86 173 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 KCNH7Q9NS40 1196 aa5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.61□□□□□ -1.51
HERPUD1-212ENST00000567944 A0A1B0GTL3 188 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 KRT37O76014 449 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 IL18BPO95998 194 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 APPP05067 770 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 MMEP08473 750 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 COL6A1P12109 1028 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 AOAHP28039 575 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 SDHAP31040 664 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 HERVK_113P62684 666 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 VMACQ2NL98 169 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 SMC1BQ8NDV3 1235 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 LEO1Q8WVC0 666 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 ASB15Q8WXK1 588 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 FOXRED1Q96CU9 486 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 SLKQ9H2G2 1235 aaPredicted RBP5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 PCDH18Q9HCL0 1135 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 SLC39A2Q9NP94 309 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 OXSMQ9NWU1 459 aa5.6□□□□□ -1.51
HERPUD1-212ENST00000567944 SH3D21A4FU49 640 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 TGM5O43548 720 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 NUAK1O60285 661 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 ENO2P09104 434 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 PTX3P26022 381 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 MC4RP32245 332 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 ADCYAP1R1P41586 468 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 AFF3P51826 1226 aaKnown RBP5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 MLLT6P55198 1093 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 SKIDA1Q1XH10 827 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 CC2D1AQ6P1N0 951 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 LCNL1Q6ZST4 164 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 KRT26Q7Z3Y9 468 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 LRRC56Q8IYG6 542 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 AHI1Q8N157 1196 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 AFAP1L2Q8N4X5 818 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 CHTF18Q8WVB6 975 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 ZSWIM3Q96MP5 696 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 TMEM209Q96SK2 561 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 ELF4Q99607 663 aaPredicted RBP5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 AMNQ9BXJ7 453 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 CAAP1Q9H8G2 361 aa5.59□□□□□ -1.51
HERPUD1-212ENST00000567944 PRAMEF25A6NGN4 478 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 RFXAPO00287 272 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 CLSTN1O94985 981 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 BPIP17213 487 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 SLC9A1P19634 815 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 KIF11P52732 1056 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 TMEM132BQ14DG7 1078 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 DHCR24Q15392 516 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 VASNQ6EMK4 673 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 ESRP1Q6NXG1 681 aaKnown RBP5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 EP400NLQ6ZTU2 488 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 RTN4RL1Q86UN2 441 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 FAM177A1Q8N128 213 aaPredicted RBP5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 TTLL6Q8N841 843 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 KIAA1958Q8N8K9 716 aa5.58□□□□□ -1.52
HERPUD1-212ENST00000567944 IGDCC4Q8TDY8 1250 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms