RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	EIF5B	O60841	1220 aa	Known RBP	7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	PPFIA3	O75145	1194 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	ATG7	O95352	703 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	STAT5B	P51692	787 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	NLRP5	P59047	1200 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	ACTR2	P61160	394 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	WDR5	P61964	334 aa	Known RBP	7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	PPFIA1	Q13136	1202 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	STK3	Q13188	491 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	MBTPS1	Q14703	1052 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	FAM26D	Q5JW98	314 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	PPP2R2D	Q66LE6	453 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	CPLX2	Q6PUV4	134 aa	Known RBP	7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	PLPPR4	Q7Z2D5	763 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	RSPH3	Q86UC2	560 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	CCDC148	Q8NFR7	591 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	LMBR1	Q8WVP7	490 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	CRYGN	Q8WXF5	182 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	PCYT2	Q99447	389 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	ZBED2	Q9BTP6	218 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	PRDM12	Q9H4Q4	367 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	VPS54	Q9P1Q0	977 aa		7.87	□□□□□ -1.15
SF3B3-209	ENST00000567635	IGLV3-22	A0A075B6J6	115 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	FAM86B1	E9PN63	330 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	IPO5	O00410	1097 aa	Known RBP	7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	DHX15	O43143	795 aa	Known RBP	7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	TLL1	O43897	1013 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	DEXI	O95424	95 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	CHRNA1	P02708	482 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	CA3	P07451	260 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	FAM86B2	P0C5J1	330 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	INSRR	P14616	1297 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	MARK3	P27448	753 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	CIITA	P33076	1130 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	SLC26A2	P50443	739 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	USP11	P51784	963 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	ANAPC15	P60006	121 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	ITGB3BP	Q13352	177 aa	Predicted RBP	7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	ANKRD1	Q15327	319 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	GRIK4	Q16099	956 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	TCTN1	Q2MV58	587 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	PLEKHG4	Q58EX7	1191 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	MARCH8	Q5T0T0	291 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	TAF2	Q6P1X5	1199 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	ABHD15	Q6UXT9	468 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	RPAIN	Q86UA6	219 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	FAM177A1	Q8N128	213 aa	Predicted RBP	7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	DBF4B	Q8NFT6	615 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	SEPT8	Q92599	483 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	ZNF577	Q9BSK1	485 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	SLK	Q9H2G2	1235 aa	Predicted RBP	7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	TBC1D22B	Q9NU19	505 aa		7.86	□□□□□ -1.15
SF3B3-209	ENST00000567635	CHD9	Q3L8U1	2897 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	NLRC5	Q86WI3	1866 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	SI	P14410	1827 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	TCF20	Q9UGU0	1960 aa	Known RBP	7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	IGKV6D-21	A0A0A0MT36	114 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	POTEB3	A0JP26	581 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	MBLAC1	A4D2B0	266 aa	Predicted RBP	7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	DDX39A	O00148	427 aa	Known RBP	7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	BACH1	O14867	736 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	CDKL5	O76039	1030 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	CCNE2	O96020	404 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	AMH	P03971	560 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	CTSH	P09668	335 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	IGFBP4	P22692	258 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	IGBP1	P78318	339 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	DEFB103A	P81534	67 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	SET	Q01105	290 aa	Predicted RBP	7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	PLCB4	Q15147	1175 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	PRR16	Q569H4	304 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	FAM160B1	Q5W0V3	765 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	GALNT17	Q6IS24	598 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	ZNF746	Q6NUN9	644 aa	Predicted RBP	7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	SWSAP1	Q6NVH7	229 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	MIS18BP1	Q6P0N0	1132 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	POTEB	Q6S5H4	581 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	RUFY4	Q6ZNE9	571 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	PHF6	Q8IWS0	365 aa	Known RBP eCLIP	7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	BLID	Q8IZY5	108 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	RASGRP4	Q8TDF6	673 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	DNAJB3	Q8WWF6	145 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	UIMC1	Q96RL1	719 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	RAD9A	Q99638	391 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	C22orf23	Q9BZE7	217 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	TUBE1	Q9UJT0	475 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	TPCN1	Q9ULQ1	816 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	TRPC6	Q9Y210	931 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635	PCDHA2	Q9Y5H9	948 aa		7.85	□□□□□ -1.15
SF3B3-209	ENST00000567635		A0A0C4DFX4	3053 aa		7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	DLL1	O00548	723 aa		7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	HBP1	O60381	514 aa		7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	PFKFB2	O60825	505 aa		7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	GJB5	O95377	273 aa		7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	RPLP2	P05387	115 aa	Known RBP	7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	PSAP	P07602	524 aa		7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	KLRC1	P26715	233 aa		7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	KRT76	Q01546	638 aa		7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	TAP1	Q03518	808 aa		7.84	□□□□□ -1.15
SF3B3-209	ENST00000567635	SCRN1	Q12765	414 aa		7.84	□□□□□ -1.15

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms