RNA–Protein interactions for RNA: ENST00000566818.1

IFT140-208, Transcript of intraflagellar transport 140, humanhuman

TSL 3

Gene IFT140, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140-208ENST00000566818 DBF4BQ8NFT6 615 aa21.34■■□□□ 1.01
IFT140-208ENST00000566818 VPS54Q9P1Q0 977 aa21.34■■□□□ 1.01
IFT140-208ENST00000566818 FAM86B1E9PN63 330 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 PPFIA3O75145 1194 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 DEXIO95424 95 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 FAM86B2P0C5J1 330 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 SLC26A2P50443 739 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 STAT5BP51692 787 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 NLRP5P59047 1200 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 FAM26DQ5JW98 314 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 FAM160B1Q5W0V3 765 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 CRYGNQ8WXF5 182 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 APBB2Q92870 758 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 PCYT2Q99447 389 aa21.33■■□□□ 1.01
IFT140-208ENST00000566818 IGLV3-22A0A075B6J6 115 aa21.32■■□□□ 1
IFT140-208ENST00000566818 MBLAC1A4D2B0 266 aaPredicted RBP21.32■■□□□ 1
IFT140-208ENST00000566818 DDX39AO00148 427 aaKnown RBP21.32■■□□□ 1
IFT140-208ENST00000566818 IPO5O00410 1097 aaKnown RBP21.32■■□□□ 1
IFT140-208ENST00000566818 DLL1O00548 723 aa21.32■■□□□ 1
IFT140-208ENST00000566818 BACH1O14867 736 aa21.32■■□□□ 1
IFT140-208ENST00000566818 CDKL5O76039 1030 aa21.32■■□□□ 1
IFT140-208ENST00000566818 GJB5O95377 273 aa21.32■■□□□ 1
IFT140-208ENST00000566818 ANAPC15P60006 121 aa21.32■■□□□ 1
IFT140-208ENST00000566818 IGBP1P78318 339 aa21.32■■□□□ 1
IFT140-208ENST00000566818 TAP1Q03518 808 aa21.32■■□□□ 1
IFT140-208ENST00000566818 ADGRE1Q14246 886 aa21.32■■□□□ 1
IFT140-208ENST00000566818 RUFY4Q6ZNE9 571 aa21.32■■□□□ 1
IFT140-208ENST00000566818 FAM177A1Q8N128 213 aaPredicted RBP21.32■■□□□ 1
IFT140-208ENST00000566818 RAD9AQ99638 391 aa21.32■■□□□ 1
IFT140-208ENST00000566818 ZNF577Q9BSK1 485 aa21.32■■□□□ 1
IFT140-208ENST00000566818 C22orf23Q9BZE7 217 aa21.32■■□□□ 1
IFT140-208ENST00000566818 TBC1D22BQ9NU19 505 aa21.32■■□□□ 1
IFT140-208ENST00000566818 MICAL3Q7RTP6 2002 aa21.31■■□□□ 1
IFT140-208ENST00000566818 INSRRP14616 1297 aa21.31■■□□□ 1
IFT140-208ENST00000566818 STK3Q13188 491 aa21.31■■□□□ 1
IFT140-208ENST00000566818 PLCB4Q15147 1175 aa21.31■■□□□ 1
IFT140-208ENST00000566818 MIS18BP1Q6P0N0 1132 aa21.31■■□□□ 1
IFT140-208ENST00000566818 RASGRP4Q8TDF6 673 aa21.31■■□□□ 1
IFT140-208ENST00000566818 IFIH1Q9BYX4 1025 aaKnown RBP21.31■■□□□ 1
IFT140-208ENST00000566818 GTPBP6O43824 516 aaPredicted RBP21.3■■□□□ 1
IFT140-208ENST00000566818 ATG7O95352 703 aa21.3■■□□□ 1
IFT140-208ENST00000566818 CIITAP33076 1130 aa21.3■■□□□ 1
IFT140-208ENST00000566818 TMCO2Q7Z6W1 182 aaPredicted RBP21.3■■□□□ 1
IFT140-208ENST00000566818 MYOCDQ8IZQ8 938 aa21.3■■□□□ 1
IFT140-208ENST00000566818 USP38Q8NB14 1042 aa21.3■■□□□ 1
IFT140-208ENST00000566818 PPM1EQ8WY54 764 aa21.3■■□□□ 1
IFT140-208ENST00000566818 ARNTL2Q8WYA1 636 aa21.3■■□□□ 1
IFT140-208ENST00000566818 EYSQ5T1H1 3165 aa21.3■■□□□ 1
IFT140-208ENST00000566818 CHD7Q9P2D1 2997 aa21.29■■□□□ 1
IFT140-208ENST00000566818 MYO9BQ13459 2157 aa21.29■■□□□ 1
IFT140-208ENST00000566818 POTEB3A0JP26 581 aa21.29■■□□□ 1
IFT140-208ENST00000566818 M0QZ92 97 aa21.29■■□□□ 1
IFT140-208ENST00000566818 ADAMTS3O15072 1205 aa21.29■■□□□ 1
IFT140-208ENST00000566818 CCNE2O96020 404 aa21.29■■□□□ 1
IFT140-208ENST00000566818 KRT76Q01546 638 aa21.29■■□□□ 1
IFT140-208ENST00000566818 ANKRD1Q15327 319 aa21.29■■□□□ 1
IFT140-208ENST00000566818 PRR16Q569H4 304 aa21.29■■□□□ 1
IFT140-208ENST00000566818 MARCH8Q5T0T0 291 aa21.29■■□□□ 1
IFT140-208ENST00000566818 ZNF746Q6NUN9 644 aaPredicted RBP21.29■■□□□ 1
IFT140-208ENST00000566818 FAM117BQ6P1L5 589 aa21.29■■□□□ 1
IFT140-208ENST00000566818 POTEBQ6S5H4 581 aa21.29■■□□□ 1
IFT140-208ENST00000566818 ABHD15Q6UXT9 468 aa21.29■■□□□ 1
IFT140-208ENST00000566818 SMAP1Q8IYB5 467 aaPredicted RBP21.29■■□□□ 1
IFT140-208ENST00000566818 LARP6Q9BRS8 491 aaKnown RBP21.29■■□□□ 1
IFT140-208ENST00000566818 CERS4Q9HA82 394 aa21.29■■□□□ 1
IFT140-208ENST00000566818 ZNF302Q9NR11 478 aa21.29■■□□□ 1
IFT140-208ENST00000566818 PCDHA4Q9UN74 947 aa21.29■■□□□ 1
IFT140-208ENST00000566818 UNC80Q8N2C7 3258 aa21.28■■□□□ 1
IFT140-208ENST00000566818 IGKV6D-21A0A0A0MT36 114 aa21.28■■□□□ 1
IFT140-208ENST00000566818 MRPS6P82932 125 aaKnown RBP21.28■■□□□ 1
IFT140-208ENST00000566818 MGAT3Q09327 533 aa21.28■■□□□ 1
IFT140-208ENST00000566818 MKRN4PQ13434 485 aaPredicted RBP21.28■■□□□ 1
IFT140-208ENST00000566818 GALNT17Q6IS24 598 aa21.28■■□□□ 1
IFT140-208ENST00000566818 PDXDC2PQ6P474 469 aa21.28■■□□□ 1
IFT140-208ENST00000566818 LIN28BQ6ZN17 250 aaKnown RBP eCLIP21.28■■□□□ 1
IFT140-208ENST00000566818 DNAJB3Q8WWF6 145 aa21.28■■□□□ 1
IFT140-208ENST00000566818 FAM49AQ9H0Q0 323 aaPredicted RBP21.28■■□□□ 1
IFT140-208ENST00000566818 SLKQ9H2G2 1235 aaPredicted RBP21.28■■□□□ 1
IFT140-208ENST00000566818 INSL6Q9Y581 213 aa21.28■■□□□ 1
IFT140-208ENST00000566818 CDY2AQ9Y6F7 541 aa21.28■■□□□ 1
IFT140-208ENST00000566818 COL1A2P08123 1366 aa21.27■■□□□ 1
IFT140-208ENST00000566818 LCHNA4D1U4 455 aa21.27■■□□□ 1
IFT140-208ENST00000566818 DHX15O43143 795 aaKnown RBP21.27■■□□□ 1
IFT140-208ENST00000566818 HBP1O60381 514 aa21.27■■□□□ 1
IFT140-208ENST00000566818 ARHGEF15O94989 841 aa21.27■■□□□ 1
IFT140-208ENST00000566818 CHRNA1P02708 482 aa21.27■■□□□ 1
IFT140-208ENST00000566818 GHRP10912 638 aa21.27■■□□□ 1
IFT140-208ENST00000566818 USP11P51784 963 aa21.27■■□□□ 1
IFT140-208ENST00000566818 IER5Q5VY09 327 aa21.27■■□□□ 1
IFT140-208ENST00000566818 CCDC60Q8IWA6 550 aaPredicted RBP21.27■■□□□ 1
IFT140-208ENST00000566818 MICALL1Q8N3F8 863 aa21.27■■□□□ 1
IFT140-208ENST00000566818 ATP8B4Q8TF62 1192 aa21.27■■□□□ 1
IFT140-208ENST00000566818 TSPYL2Q9H2G4 693 aaPredicted RBP21.27■■□□□ 1
IFT140-208ENST00000566818 PCDHA2Q9Y5H9 948 aa21.27■■□□□ 1
IFT140-208ENST00000566818 PSAPP07602 524 aa21.26■□□□□ 0.99
IFT140-208ENST00000566818 XBP1P17861 261 aa21.26■□□□□ 0.99
IFT140-208ENST00000566818 CCDC85BQ15834 202 aaPredicted RBP21.26■□□□□ 0.99
IFT140-208ENST00000566818 TSHZ1Q6ZSZ6 1077 aa21.26■□□□□ 0.99
IFT140-208ENST00000566818 CKAP2LQ8IYA6 745 aa21.26■□□□□ 0.99
IFT140-208ENST00000566818 BLIDQ8IZY5 108 aa21.26■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms