RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 AMPD2Q01433 879 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 KIF4BQ2VIQ3 1234 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 ZC3H12AQ5D1E8 599 aaKnown RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 SLC35F1Q5T1Q4 408 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 CYB5RLQ6IPT4 315 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 LVRNQ6Q4G3 990 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 B3GNT9Q6UX72 402 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 TTLL7Q6ZT98 887 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 RSRC2Q7L4I2 434 aaKnown RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 UBE3DQ7Z6J8 389 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 SLC41A1Q8IVJ1 513 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 MRPL41Q8IXM3 137 aaKnown RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 MIER2Q8N344 545 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 ARHGEF39Q8N4T4 335 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 NKAPQ8N5F7 415 aaKnown RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 MYCT1Q8N699 235 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 C2CD4AQ8NCU7 369 aaPredicted RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 NGDNQ8NEJ9 315 aaKnown RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 CYB5D2Q8WUJ1 264 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 ATXN2LQ8WWM7 1075 aaKnown RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 C1orf159Q96HA4 380 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 RCC1LQ96I51 464 aaKnown RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 SGCZQ96LD1 299 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 ORAI3Q9BRQ5 295 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 ALG1Q9BT22 464 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 WDR18Q9BV38 432 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 DSCC1Q9BVC3 393 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 CSRNP2Q9H175 543 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 VPS11Q9H270 941 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 SMOC1Q9H4F8 434 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 SOX17Q9H6I2 414 aaPredicted RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 ARFGAP3Q9NP61 516 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 TOPORSQ9NS56 1045 aaPredicted RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 SMC4Q9NTJ3 1288 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 CCM2LQ9NUG4 571 aaPredicted RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 TRMT13Q9NUP7 481 aaKnown RBP4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 OXSMQ9NWU1 459 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 B4GALT6Q9UBX8 382 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 CDC23Q9UJX2 597 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 POLHQ9Y253 713 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 PCDHB12Q9Y5F1 795 aa4.02□□□□□ -1.77
HERPUD1-211ENST00000566550 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 LCHNA4D1U4 455 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 hCG_1984214I3L0E3 225 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 STXBP3O00186 592 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 FIBPO43427 364 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 AOC2O75106 756 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 ZBED1O96006 694 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 CPP00450 1065 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 OSMP13725 252 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 NAT1P18440 290 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 GRK2P25098 689 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 TERF1P54274 439 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 RNF4P78317 190 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 ST5P78524 1137 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 ID3Q02535 119 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 DDX10Q13206 875 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 IFIT5Q13325 482 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 CNGB1Q14028 1251 aaPredicted RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 KRT72Q14CN4 511 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 UAP1L1Q3KQV9 507 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 CCDC93Q567U6 631 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 ICE2Q659A1 982 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 DENND5AQ6IQ26 1287 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 CC2D1AQ6P1N0 951 aaPredicted RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 ZNF765Q7L2R6 523 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 CHST15Q7LFX5 561 aaPredicted RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 PTRH1Q86Y79 214 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 C2orf69Q8N8R5 385 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 SPATA5Q8NB90 893 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 ZNF507Q8TCN5 953 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 PGBD4Q96DM1 585 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 CDK5RAP3Q96JB5 506 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 CCDC140Q96MF4 163 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 NAP1L5Q96NT1 182 aaPredicted RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 FAM193BQ96PV7 902 aaPredicted RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 MAP3K14Q99558 947 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 GTPBP4Q9BZE4 634 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 NRSN2Q9GZP1 204 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 SSU72Q9NP77 194 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 GFOD1Q9NXC2 390 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 RAPGEFL1Q9UHV5 662 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 AP4E1Q9UPM8 1137 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 PTPN22Q9Y2R2 807 aa4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 NOC2LQ9Y3T9 749 aaKnown RBP4.01□□□□□ -1.77
HERPUD1-211ENST00000566550 CCDC66A2RUB6 948 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 KRTAP9-7A8MTY7 169 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 ARVCFO00192 962 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 FANCGO15287 622 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 MEFVO15553 781 aaPredicted RBP4□□□□□ -1.77
HERPUD1-211ENST00000566550 ANP32CO43423 234 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 SNX2O60749 519 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 RNGTTO60942 597 aaKnown RBP4□□□□□ -1.77
HERPUD1-211ENST00000566550 THBDP07204 575 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 NFICP08651 508 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 RAB6AP20340 208 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 ABCB4P21439 1286 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 MCCP23508 829 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 COPB2P35606 906 aa4□□□□□ -1.77
HERPUD1-211ENST00000566550 FXR1P51114 621 aaKnown RBP eCLIP4□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms