RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 LACTBP83111 547 aaPredicted RBP7.25□□□□□ -1.25
UBR1-205ENST00000564540 DBPQ10586 325 aaPredicted RBP7.25□□□□□ -1.25
UBR1-205ENST00000564540 SEC23AQ15436 765 aa7.25□□□□□ -1.25
UBR1-205ENST00000564540 UBXN11Q5T124 520 aa7.25□□□□□ -1.25
UBR1-205ENST00000564540 EP400NLQ6ZTU2 488 aa7.25□□□□□ -1.25
UBR1-205ENST00000564540 YTHDC1Q96MU7 727 aaKnown RBP7.25□□□□□ -1.25
UBR1-205ENST00000564540 WRNIP1Q96S55 665 aa7.25□□□□□ -1.25
UBR1-205ENST00000564540 ARHGAP20Q9P2F6 1191 aa7.25□□□□□ -1.25
UBR1-205ENST00000564540 ZFP69BQ9UJL9 534 aa7.25□□□□□ -1.25
UBR1-205ENST00000564540 PLD2O14939 933 aa7.24□□□□□ -1.25
UBR1-205ENST00000564540 PPP1R12AO14974 1030 aaPredicted RBP7.24□□□□□ -1.25
UBR1-205ENST00000564540 CYP7B1O75881 506 aa7.24□□□□□ -1.25
UBR1-205ENST00000564540 CYP1A1P04798 512 aaPredicted RBP7.24□□□□□ -1.25
UBR1-205ENST00000564540 TM4SF20Q53R12 229 aa7.24□□□□□ -1.25
UBR1-205ENST00000564540 ZFYVE27Q5T4F4 411 aa7.24□□□□□ -1.25
UBR1-205ENST00000564540 CPZQ66K79 652 aa7.24□□□□□ -1.25
UBR1-205ENST00000564540 STPG3Q8N7X2 389 aa7.24□□□□□ -1.25
UBR1-205ENST00000564540 IGSF22Q8N9C0 903 aa7.24□□□□□ -1.25
UBR1-205ENST00000564540 CXorf38Q8TB03 319 aa7.24□□□□□ -1.25
UBR1-205ENST00000564540 LCORQ96JN0 433 aaPredicted RBP7.24□□□□□ -1.25
UBR1-205ENST00000564540 CELF4Q9BZC1 486 aaKnown RBP7.24□□□□□ -1.25
UBR1-205ENST00000564540 ESYT3A0FGR9 886 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 FBXO21O94952 628 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 IL18BPO95998 194 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 C4BPAP04003 597 aaKnown RBP7.23□□□□□ -1.25
UBR1-205ENST00000564540 APPP05067 770 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 KRTAP10-2P60368 255 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 HHIPL2Q6UWX4 724 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 OVCH1Q7RTY7 1134 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 IGDCC4Q8TDY8 1250 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 RNPC3Q96LT9 517 aaKnown RBP7.23□□□□□ -1.25
UBR1-205ENST00000564540 TACO1Q9BSH4 297 aaKnown RBP7.23□□□□□ -1.25
UBR1-205ENST00000564540 BDH2Q9BUT1 245 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 TMEM168Q9H0V1 697 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 FTSJ1Q9UET6 329 aa7.23□□□□□ -1.25
UBR1-205ENST00000564540 PRAMEF25A6NGN4 478 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 SYN1P17600 705 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 KIAA2012Q0VF49 1180 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 SMAD2Q15796 467 aaKnown RBP7.22□□□□□ -1.25
UBR1-205ENST00000564540 NOSTRINQ8IVI9 506 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 NUDT10Q8NFP7 164 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 MBD6Q96DN6 1003 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 NUDT11Q96G61 164 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 KCND1Q9NSA2 647 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 TMEM260Q9NX78 707 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 INVSQ9Y283 1065 aa7.22□□□□□ -1.25
UBR1-205ENST00000564540 C9orf118A6NHY6 69 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 SCDO00767 359 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 B4GALT3O60512 393 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 CLASP2O75122 1294 aaKnown RBP7.21□□□□□ -1.26
UBR1-205ENST00000564540 KLHL18O94889 574 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 ASMTLO95671 621 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 KNG1P01042 644 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 GJA4P35212 333 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 SKOR2Q2VWA4 1001 aaPredicted RBP7.21□□□□□ -1.26
UBR1-205ENST00000564540 TMEM177Q53S58 311 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 FAM124AQ86V42 546 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 ARHGAP28Q9P2N2 729 aa7.21□□□□□ -1.26
UBR1-205ENST00000564540 DNAJC8O75937 253 aaPredicted RBP7.2□□□□□ -1.26
UBR1-205ENST00000564540 MC4RP32245 332 aa7.2□□□□□ -1.26
UBR1-205ENST00000564540 ZNF460Q14592 562 aa7.2□□□□□ -1.26
UBR1-205ENST00000564540 FNDC3BQ53EP0 1204 aaKnown RBP7.2□□□□□ -1.26
UBR1-205ENST00000564540 BORAQ6PGQ7 559 aa7.2□□□□□ -1.26
UBR1-205ENST00000564540 LGI4Q8N135 537 aa7.2□□□□□ -1.26
UBR1-205ENST00000564540 TNPO3Q9Y5L0 923 aaKnown RBP7.2□□□□□ -1.26
UBR1-205ENST00000564540 GLRX3O76003 335 aaKnown RBP7.19□□□□□ -1.26
UBR1-205ENST00000564540 MMEP08473 750 aa7.19□□□□□ -1.26
UBR1-205ENST00000564540 CELA3BP08861 270 aa7.19□□□□□ -1.26
UBR1-205ENST00000564540 SDSP20132 328 aa7.19□□□□□ -1.26
UBR1-205ENST00000564540 NFATC3Q12968 1075 aa7.19□□□□□ -1.26
UBR1-205ENST00000564540 C2orf69Q8N8R5 385 aa7.19□□□□□ -1.26
UBR1-205ENST00000564540 SAMD15Q9P1V8 674 aa7.19□□□□□ -1.26
UBR1-205ENST00000564540 BTBD7Q9P203 1132 aa7.19□□□□□ -1.26
UBR1-205ENST00000564540 ZDHHC9Q9Y397 364 aa7.19□□□□□ -1.26
UBR1-205ENST00000564540 SLC12A8A0AV02 714 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 M0R2C6 588 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 OPA1O60313 960 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 CHGBP05060 677 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 PTGS1P23219 599 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 AOAHP28039 575 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 IGFALSP35858 605 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 PLP2Q04941 152 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 C21orf62-AS1Q17RA5 79 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 TBC1D10BQ4KMP7 808 aaPredicted RBP7.18□□□□□ -1.26
UBR1-205ENST00000564540 ZCCHC8Q6NZY4 707 aaKnown RBP7.18□□□□□ -1.26
UBR1-205ENST00000564540 PKN3Q6P5Z2 889 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 KBTBD2Q8IY47 623 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 KLHL36Q8N4N3 616 aa7.18□□□□□ -1.26
UBR1-205ENST00000564540 BARX1Q9HBU1 254 aaPredicted RBP7.18□□□□□ -1.26
UBR1-205ENST00000564540 RASSF10A6NK89 507 aa7.17□□□□□ -1.26
UBR1-205ENST00000564540 NPTXRO95502 500 aa7.17□□□□□ -1.26
UBR1-205ENST00000564540 MECP2P51608 486 aaKnown RBP7.17□□□□□ -1.26
UBR1-205ENST00000564540 HERVK_113P62684 666 aa7.17□□□□□ -1.26
UBR1-205ENST00000564540 IRF9Q00978 393 aa7.17□□□□□ -1.26
UBR1-205ENST00000564540 PABPC4Q13310 644 aaKnown RBP eCLIP7.17□□□□□ -1.26
UBR1-205ENST00000564540 Q6ZUG5 572 aa7.17□□□□□ -1.26
UBR1-205ENST00000564540 DDX53Q86TM3 631 aaKnown RBP7.17□□□□□ -1.26
UBR1-205ENST00000564540 ASB15Q8WXK1 588 aa7.17□□□□□ -1.26
UBR1-205ENST00000564540 INCENPQ9NQS7 918 aa7.17□□□□□ -1.26
UBR1-205ENST00000564540 KCNH7Q9NS40 1196 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms