RNA–Protein interactions for RNA: ENST00000564247.1

CMTM3-208, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,127 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-208ENST00000564247 ITGB3BPQ13352 177 aaPredicted RBP19.03■□□□□ 0.64
CMTM3-208ENST00000564247 PPP2R5CQ13362 524 aa19.03■□□□□ 0.64
CMTM3-208ENST00000564247 FSCN1Q16658 493 aaKnown RBP19.03■□□□□ 0.64
CMTM3-208ENST00000564247 SPECC1Q5M775 1068 aa19.03■□□□□ 0.64
CMTM3-208ENST00000564247 NCAPH2Q6IBW4 605 aa19.03■□□□□ 0.64
CMTM3-208ENST00000564247 MLXIPQ9HAP2 919 aa19.03■□□□□ 0.64
CMTM3-208ENST00000564247 CCDC39Q9UFE4 941 aa19.03■□□□□ 0.64
CMTM3-208ENST00000564247 PRKAG2Q9UGJ0 569 aa19.03■□□□□ 0.64
CMTM3-208ENST00000564247 LTBP2Q14767 1821 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 NKRFO15226 690 aaKnown RBP eCLIP19.02■□□□□ 0.64
CMTM3-208ENST00000564247 DHX15O43143 795 aaKnown RBP19.02■□□□□ 0.64
CMTM3-208ENST00000564247 PTGS1P23219 599 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 LY6KQ17RY6 165 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 MIER3Q7Z3K6 550 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 DHX37Q8IY37 1157 aaKnown RBP19.02■□□□□ 0.64
CMTM3-208ENST00000564247 RASSF8Q8NHQ8 419 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 SYMPKQ92797 1274 aaKnown RBP19.02■□□□□ 0.64
CMTM3-208ENST00000564247 CALML4Q96GE6 196 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 TOX2Q96NM4 488 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 PYM1Q9BRP8 204 aaKnown RBP19.02■□□□□ 0.64
CMTM3-208ENST00000564247 UNC45AQ9H3U1 944 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 JPH1Q9HDC5 661 aaPredicted RBP19.02■□□□□ 0.64
CMTM3-208ENST00000564247 SLC9A2Q9UBY0 812 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 VAV3Q9UKW4 847 aa19.02■□□□□ 0.64
CMTM3-208ENST00000564247 LAMA3Q16787 3333 aa19.02■□□□□ 0.63
CMTM3-208ENST00000564247 A0A1B0GVL5 298 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 POTEMA6NI47 508 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 SLC26A4O43511 780 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 CHMP2AO43633 222 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 ZEB2O60315 1214 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 CABYRO75952 493 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 GGPS1O95749 300 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 SFNP31947 248 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 JAK3P52333 1124 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 SP2Q02086 613 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 EPHA7Q15375 998 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 HAUS3Q68CZ6 603 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 ZNF746Q6NUN9 644 aaPredicted RBP19.01■□□□□ 0.63
CMTM3-208ENST00000564247 CCDC62Q6P9F0 684 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 CYFIP1Q7L576 1253 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 ANKRD33Q7Z3H0 272 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 CABP7Q86V35 215 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 RDM1Q8NG50 284 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 EPSTI1Q96J88 318 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 CDK5RAP3Q96JB5 506 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 CCSER1Q9C0I3 900 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 PDLIM7Q9NR12 457 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 KCNH3Q9ULD8 1083 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 SAMM50Q9Y512 469 aa19.01■□□□□ 0.63
CMTM3-208ENST00000564247 WDR64B1ANS9 1081 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 GH1P01241 217 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 PFKFB1P16118 471 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 UBA1P22314 1058 aaKnown RBP19■□□□□ 0.63
CMTM3-208ENST00000564247 SYKP43405 635 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 CDK7P50613 346 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 SPIRE1Q08AE8 756 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 LAMC2Q13753 1193 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 METTL7BQ6UX53 244 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 SMAP1Q8IYB5 467 aaPredicted RBP19■□□□□ 0.63
CMTM3-208ENST00000564247 SNX29Q8TEQ0 813 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 LBHD1Q9BQE6 289 aaPredicted RBP19■□□□□ 0.63
CMTM3-208ENST00000564247 MROH7Q68CQ1 1323 aa19■□□□□ 0.63
CMTM3-208ENST00000564247 A0A0U1RQG5 324 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-208ENST00000564247 FAM237AA0A1B0GTK4 181 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 PP2D1A8MPX8 630 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 ARVCFO00192 962 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 PQBP1O60828 265 aaKnown RBP18.99■□□□□ 0.63
CMTM3-208ENST00000564247 ARIH2O95376 493 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 CLTBP09497 229 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 CDC25AP30304 524 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 CCT6AP40227 531 aaKnown RBP18.99■□□□□ 0.63
CMTM3-208ENST00000564247 CPT1AP50416 773 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 FXR1P51114 621 aaKnown RBP eCLIP18.99■□□□□ 0.63
CMTM3-208ENST00000564247 NDUFA8P51970 172 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 MDM2Q00987 491 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-208ENST00000564247 FAM160A1Q05DH4 1040 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 ZRSR1Q15695 479 aaKnown RBP18.99■□□□□ 0.63
CMTM3-208ENST00000564247 CELF3Q5SZQ8 465 aaKnown RBP18.99■□□□□ 0.63
CMTM3-208ENST00000564247 B3GNT9Q6UX72 402 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 CXCL17Q6UXB2 119 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 USP49Q70CQ1 688 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 OR6J1Q8NGC5 347 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 VTI1AQ96AJ9 217 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 PANK2Q9BZ23 570 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 PRDM5Q9NQX1 630 aaPredicted RBP18.99■□□□□ 0.63
CMTM3-208ENST00000564247 DISC1Q9NRI5 854 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 PCDHA10Q9Y5I2 948 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 KDM3AQ9Y4C1 1321 aa18.99■□□□□ 0.63
CMTM3-208ENST00000564247 DCDC2CA8MYV0 355 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 EML1O00423 815 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 SORBS3O60504 671 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 SLC34A2O95436 690 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 PSAPP07602 524 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 SP4Q02446 784 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 RRAGBQ5VZM2 374 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 MIS18BP1Q6P0N0 1132 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 SH3RF1Q7Z6J0 888 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 NEK9Q8TD19 979 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 CCDC34Q96HJ3 373 aa18.98■□□□□ 0.63
CMTM3-208ENST00000564247 EIF2AK1Q9BQI3 630 aaKnown RBP18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms