RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 PRDM14Q9GZV8 571 aa5.7□□□□□ -1.5
CDR2-203ENST00000563573 MKRN2Q9H000 416 aaKnown RBP5.7□□□□□ -1.5
CDR2-203ENST00000563573 USP44Q9H0E7 712 aa5.7□□□□□ -1.5
CDR2-203ENST00000563573 IRF2BPLQ9H1B7 796 aa5.7□□□□□ -1.5
CDR2-203ENST00000563573 SIRT5Q9NXA8 310 aa5.7□□□□□ -1.5
CDR2-203ENST00000563573 UBP1Q9NZI7 540 aa5.7□□□□□ -1.5
CDR2-203ENST00000563573 NARFQ9UHQ1 456 aa5.7□□□□□ -1.5
CDR2-203ENST00000563573 PCDHB12Q9Y5F1 795 aa5.7□□□□□ -1.5
CDR2-203ENST00000563573 NUP188Q5SRE5 1749 aa5.7□□□□□ -1.5
CDR2-203ENST00000563573 RGPD3A6NKT7 1758 aaPredicted RBP5.7□□□□□ -1.5
CDR2-203ENST00000563573 RGPD4Q7Z3J3 1758 aa5.7□□□□□ -1.5
CDR2-203ENST00000563573 COL15A1P39059 1388 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 IBTKQ9P2D0 1353 aaPredicted RBP5.69□□□□□ -1.5
CDR2-203ENST00000563573 TNS1Q9HBL0 1735 aaKnown RBP5.69□□□□□ -1.5
CDR2-203ENST00000563573 TMEM82A0PJX8 343 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 MPOP05164 745 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 BMP8BP34820 402 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 SRSF3P84103 164 aaKnown RBP5.69□□□□□ -1.5
CDR2-203ENST00000563573 ATP8B2P98198 1209 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 CLCQ05315 142 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 HDAC1Q13547 482 aaPredicted RBP5.69□□□□□ -1.5
CDR2-203ENST00000563573 HLFQ16534 295 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 BBS9Q3SYG4 887 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 TCERG1LQ5VWI1 586 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 KIAA0825Q8IV33 1275 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 ANKRD44Q8N8A2 993 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 GCC1Q96CN9 775 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 MEIS3Q99687 375 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 ISCA1Q9BUE6 129 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 KRTAP4-9Q9BYQ8 210 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 TFCP2L1Q9NZI6 479 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 TRMT112Q9UI30 125 aaKnown RBP5.69□□□□□ -1.5
CDR2-203ENST00000563573 FBXL21Q9UKT6 434 aa5.69□□□□□ -1.5
CDR2-203ENST00000563573 A0A1W2PQ45 241 aaPredicted RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 A0A1W2PQY0 241 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 NPHP1O15259 732 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 FKTNO75072 461 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 CAMTA2O94983 1202 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 PCCAP05165 728 aaPredicted RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 NBPF7P0C2Y1 421 aaPredicted RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 POLR2BP30876 1174 aaKnown RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 SNW1Q13573 536 aaKnown RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 AUHQ13825 339 aaKnown RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 EZH2Q15910 746 aaKnown RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 HSP90AB4PQ58FF6 505 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 NLRP10Q86W26 655 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 SIRT2Q8IXJ6 389 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 ZNF34Q8IZ26 560 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 ZBTB38Q8NAP3 1195 aaPredicted RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 SIGLEC10Q96LC7 697 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 SLC6A18Q96N87 628 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 CAMKK2Q96RR4 588 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 SPON2Q9BUD6 331 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 UTP14AQ9BVJ6 771 aaKnown RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 NYXQ9GZU5 481 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 GCM1Q9NP62 436 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 STK32BQ9NY57 414 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 NIP7Q9Y221 180 aaKnown RBP eCLIP5.68□□□□□ -1.5
CDR2-203ENST00000563573 KCTD3Q9Y597 815 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 LRRFIP2Q9Y608 721 aaKnown RBP5.68□□□□□ -1.5
CDR2-203ENST00000563573 IRAK3Q9Y616 596 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 TAF6LQ9Y6J9 622 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 UBR3Q6ZT12 1888 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 UTYO14607 1347 aa5.68□□□□□ -1.5
CDR2-203ENST00000563573 BCORQ6W2J9 1755 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 FADS2P1A8MWK0 482 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 SRGAP3O43295 1099 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 IGHDP01880 384 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 GSNP06396 782 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 INHBBP09529 407 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 GPTP24298 496 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 ERVFRD-1P60508 538 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 YBX1P67809 324 aaKnown RBP5.67□□□□□ -1.5
CDR2-203ENST00000563573 G3BP1Q13283 466 aaKnown RBP eCLIP5.67□□□□□ -1.5
CDR2-203ENST00000563573 CEP85Q6P2H3 762 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 UBE3BQ7Z3V4 1068 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 TMEM192Q8IY95 271 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 TMEM87AQ8NBN3 555 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 FAM89AQ96GI7 184 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 DCTPP1Q9H773 170 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 MYH3P11055 1940 aa5.67□□□□□ -1.5
CDR2-203ENST00000563573 UNCXA6NJT0 531 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 IRS4O14654 1257 aaPredicted RBP5.66□□□□□ -1.5
CDR2-203ENST00000563573 PDE8AO60658 829 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 RAB11FIP3O75154 756 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 ZNF205O95201 554 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 CTSWP56202 376 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 SLC15A2Q16348 729 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 CCDC57Q2TAC2 916 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 ANKRD45Q5TZF3 282 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 SUSD4Q5VX71 490 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 C7orf61Q8IZ16 206 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 NLGN1Q8N2Q7 840 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 TAB3Q8N5C8 712 aaPredicted RBP5.66□□□□□ -1.5
CDR2-203ENST00000563573 SSH3Q8TE77 659 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 SUCLG2Q96I99 432 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 ZNF512BQ96KM6 892 aaPredicted RBP5.66□□□□□ -1.5
CDR2-203ENST00000563573 CDADC1Q9BWV3 514 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 SGPP1Q9BX95 441 aa5.66□□□□□ -1.5
CDR2-203ENST00000563573 ZCCHC4Q9H5U6 513 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms