RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 PRR16Q569H4 304 aa20.24■□□□□ 0.83
CMTM3-204ENST00000562357 MIS18BP1Q6P0N0 1132 aa20.24■□□□□ 0.83
CMTM3-204ENST00000562357 TRAF7Q6Q0C0 670 aa20.24■□□□□ 0.83
CMTM3-204ENST00000562357 PLPPR4Q7Z2D5 763 aa20.24■□□□□ 0.83
CMTM3-204ENST00000562357 CRYGNQ8WXF5 182 aa20.24■□□□□ 0.83
CMTM3-204ENST00000562357 PCDHA4Q9UN74 947 aa20.24■□□□□ 0.83
CMTM3-204ENST00000562357 TRIP12Q14669 1992 aaPredicted RBP20.24■□□□□ 0.83
CMTM3-204ENST00000562357 IGBP1P78318 339 aa20.23■□□□□ 0.83
CMTM3-204ENST00000562357 ADAM17P78536 824 aa20.23■□□□□ 0.83
CMTM3-204ENST00000562357 GPNMBQ14956 572 aa20.23■□□□□ 0.83
CMTM3-204ENST00000562357 SEPT8Q92599 483 aa20.23■□□□□ 0.83
CMTM3-204ENST00000562357 IGLV3-22A0A075B6J6 115 aa20.22■□□□□ 0.83
CMTM3-204ENST00000562357 TLL1O43897 1013 aa20.22■□□□□ 0.83
CMTM3-204ENST00000562357 SCRN1Q12765 414 aa20.22■□□□□ 0.83
CMTM3-204ENST00000562357 MBTPS1Q14703 1052 aa20.22■□□□□ 0.83
CMTM3-204ENST00000562357 PRDM12Q9H4Q4 367 aa20.22■□□□□ 0.83
CMTM3-204ENST00000562357 TPCN1Q9ULQ1 816 aa20.22■□□□□ 0.83
CMTM3-204ENST00000562357 POTEB3A0JP26 581 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 M0QZ92 97 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 PFKFB2O60825 505 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 AMHP03971 560 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 CA3P07451 260 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 INSRRP14616 1297 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 MYOGP15173 224 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 CIITAP33076 1130 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 USP11P51784 963 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 AK2P54819 239 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 KRT76Q01546 638 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 ZNF746Q6NUN9 644 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-204ENST00000562357 POTEBQ6S5H4 581 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 SMAP1Q8IYB5 467 aaPredicted RBP20.21■□□□□ 0.83
CMTM3-204ENST00000562357 BLIDQ8IZY5 108 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 DBF4BQ8NFT6 615 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 WASF1Q92558 559 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 APBB2Q92870 758 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 PCYT2Q99447 389 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 STK36Q9NRP7 1315 aa20.21■□□□□ 0.83
CMTM3-204ENST00000562357 MBLAC1A4D2B0 266 aaPredicted RBP20.2■□□□□ 0.82
CMTM3-204ENST00000562357 ADAMTS3O15072 1205 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 ATG7O95352 703 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 CCNE2O96020 404 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 PLCB4Q15147 1175 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 PLEKHG4Q58EX7 1191 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 PDXDC2PQ6P474 469 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 RPAINQ86UA6 219 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 CKAP2LQ8IYA6 745 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 DAGLBQ8NCG7 672 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 ZNF302Q9NR11 478 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 SAMM50Q9Y512 469 aa20.2■□□□□ 0.82
CMTM3-204ENST00000562357 HBP1O60381 514 aa20.19■□□□□ 0.82
CMTM3-204ENST00000562357 DEFB103AP81534 67 aa20.19■□□□□ 0.82
CMTM3-204ENST00000562357 FAM26DQ5JW98 314 aa20.19■□□□□ 0.82
CMTM3-204ENST00000562357 ABHD15Q6UXT9 468 aa20.19■□□□□ 0.82
CMTM3-204ENST00000562357 RUFY4Q6ZNE9 571 aa20.19■□□□□ 0.82
CMTM3-204ENST00000562357 TBCKQ8TEA7 893 aa20.19■□□□□ 0.82
CMTM3-204ENST00000562357 DNAJB3Q8WWF6 145 aa20.19■□□□□ 0.82
CMTM3-204ENST00000562357 UIMC1Q96RL1 719 aa20.19■□□□□ 0.82
CMTM3-204ENST00000562357 FAM49AQ9H0Q0 323 aaPredicted RBP20.19■□□□□ 0.82
CMTM3-204ENST00000562357 TET1Q8NFU7 2136 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 IGKV6D-21A0A0A0MT36 114 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 GAS7O60861 476 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 PSAPP07602 524 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 IGFBP4P22692 258 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 NEK4P51957 841 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 NONOQ15233 471 aaKnown RBP eCLIP20.18■□□□□ 0.82
CMTM3-204ENST00000562357 IER5Q5VY09 327 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 SWSAP1Q6NVH7 229 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 KRT25Q7Z3Z0 450 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 MYOCDQ8IZQ8 938 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 ATP8B4Q8TF62 1192 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 IL17RAQ96F46 866 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 IFIH1Q9BYX4 1025 aaKnown RBP20.18■□□□□ 0.82
CMTM3-204ENST00000562357 PCDHA10Q9Y5I2 948 aa20.18■□□□□ 0.82
CMTM3-204ENST00000562357 KAT6AQ92794 2004 aa20.17■□□□□ 0.82
CMTM3-204ENST00000562357 CCDC194A0A1B0GVG4 234 aa20.17■□□□□ 0.82
CMTM3-204ENST00000562357 WDR64B1ANS9 1081 aa20.17■□□□□ 0.82
CMTM3-204ENST00000562357 DHX15O43143 795 aaKnown RBP20.17■□□□□ 0.82
CMTM3-204ENST00000562357 GJB5O95377 273 aa20.17■□□□□ 0.82
CMTM3-204ENST00000562357 MARCH8Q5T0T0 291 aa20.17■□□□□ 0.82
CMTM3-204ENST00000562357 CCDC60Q8IWA6 550 aaPredicted RBP20.17■□□□□ 0.82
CMTM3-204ENST00000562357 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.17■□□□□ 0.82
CMTM3-204ENST00000562357 AIFM3Q96NN9 605 aa20.17■□□□□ 0.82
CMTM3-204ENST00000562357 RAD9AQ99638 391 aa20.17■□□□□ 0.82
CMTM3-204ENST00000562357 BRMS1Q9HCU9 246 aa20.17■□□□□ 0.82
CMTM3-204ENST00000562357 ORC3Q9UBD5 711 aaPredicted RBP20.17■□□□□ 0.82
CMTM3-204ENST00000562357 COL1A2P08123 1366 aa20.17■□□□□ 0.82
CMTM3-204ENST00000562357 CHRNA1P02708 482 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 GHRP10912 638 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 MRPS6P82932 125 aaKnown RBP20.16■□□□□ 0.82
CMTM3-204ENST00000562357 ZNF484Q5JVG2 852 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 LRCH2Q5VUJ6 765 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 FAM117BQ6P1L5 589 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 FAM167AQ96KS9 214 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 RIT2Q99578 217 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 TEKT3Q9BXF9 490 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 KCNJ14Q9UNX9 436 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 CEP131Q9UPN4 1083 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 PCDHA2Q9Y5H9 948 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 CDY2AQ9Y6F7 541 aa20.16■□□□□ 0.82
CMTM3-204ENST00000562357 MSH4O15457 936 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms