RNA–Protein interactions for RNA: ENST00000561945.1

SPG7-205, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 3

Gene SPG7, Length 411 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-205ENST00000561945 PABPC5Q96DU9 382 aaKnown RBP16.67■□□□□ 0.26
SPG7-205ENST00000561945 IL17RAQ96F46 866 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 LRFN3Q9BTN0 628 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 C11orf16Q9NQ32 467 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 KCNH7Q9NS40 1196 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 RWDD3Q9Y3V2 267 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 CNTNAP5Q8WYK1 1306 aa16.67■□□□□ 0.26
SPG7-205ENST00000561945 KIAA1671Q9BY89 1806 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 GRXCR2A6NFK2 248 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 hCG_1984214I3L0E3 225 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 UPP2O95045 317 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 ATG7O95352 703 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 KCNA5P22460 613 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 PLA2G5P39877 138 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 EXOSC10Q01780 885 aaKnown RBP16.66■□□□□ 0.26
SPG7-205ENST00000561945 TYW1BQ6NUM6 668 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 APOA5Q6Q788 366 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 TSHZ1Q6ZSZ6 1077 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 PLPPR4Q7Z2D5 763 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 ZNF713Q8N859 430 aaPredicted RBP16.66■□□□□ 0.26
SPG7-205ENST00000561945 MXRA8Q9BRK3 442 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 LMAN2LQ9H0V9 348 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 NSUN3Q9H649 340 aaKnown RBP16.66■□□□□ 0.26
SPG7-205ENST00000561945 JPH1Q9HDC5 661 aaPredicted RBP16.66■□□□□ 0.26
SPG7-205ENST00000561945 RIC8AQ9NPQ8 531 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 RBM28Q9NW13 759 aaKnown RBP16.66■□□□□ 0.26
SPG7-205ENST00000561945 LOXHD1Q8IVV2 1947 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 ADGRA3Q8IWK6 1321 aa16.66■□□□□ 0.26
SPG7-205ENST00000561945 IGKV6D-21A0A0A0MT36 114 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 hCG_1642624A0A1W2PR95 340 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 DGKIO75912 1065 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 FOSP01100 380 aaPredicted RBP16.65■□□□□ 0.26
SPG7-205ENST00000561945 GHRP10912 638 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 BMPR1AP36894 532 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 CLK2P49760 499 aaKnown RBP16.65■□□□□ 0.26
SPG7-205ENST00000561945 RCAN1P53805 252 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 MRPS6P82932 125 aaKnown RBP16.65■□□□□ 0.26
SPG7-205ENST00000561945 BMP2KLQ5H9B9 411 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 WWC2Q6AWC2 1192 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 FIBCD1Q8N539 461 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 DNAJB3Q8WWF6 145 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 GLG1Q92896 1179 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 SLC9A2Q9UBY0 812 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 PCDHA2Q9Y5H9 948 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 KDM3AQ9Y4C1 1321 aa16.65■□□□□ 0.26
SPG7-205ENST00000561945 TRIOO75962 3097 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 NCK2O43639 380 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 INSRRP14616 1297 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 IL9P15248 144 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 SLC26A2P50443 739 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 CTC1Q2NKJ3 1217 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 TCEAL5Q5H9L2 206 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 TMEM31Q5JXX7 168 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 PTCRAQ6ISU1 281 aaPredicted RBP16.64■□□□□ 0.25
SPG7-205ENST00000561945 HEATR3Q7Z4Q2 680 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 MICU3Q86XE3 530 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 LINC01599Q8WXQ3 324 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 TNPO1Q92973 898 aaKnown RBP16.64■□□□□ 0.25
SPG7-205ENST00000561945 C11orf84Q9BUA3 381 aaPredicted RBP16.64■□□□□ 0.25
SPG7-205ENST00000561945 FTHL17Q9BXU8 183 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 LRRC2Q9BYS8 371 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 AGO3Q9H9G7 860 aaKnown RBP16.64■□□□□ 0.25
SPG7-205ENST00000561945 ANO2Q9NQ90 1003 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 CDY2AQ9Y6F7 541 aa16.64■□□□□ 0.25
SPG7-205ENST00000561945 MEIS1O00470 390 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 MARK3P27448 753 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 ACTR2P61160 394 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 IRX6P78412 446 aaPredicted RBP16.63■□□□□ 0.25
SPG7-205ENST00000561945 ITGB3BPQ13352 177 aaPredicted RBP16.63■□□□□ 0.25
SPG7-205ENST00000561945 AP3B2Q13367 1082 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 PLCB4Q15147 1175 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 CEP55Q53EZ4 464 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 RNF20Q5VTR2 975 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 IER5Q5VY09 327 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 NIPA1Q7RTP0 329 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 RTN4RL1Q86UN2 441 aaPredicted RBP16.63■□□□□ 0.25
SPG7-205ENST00000561945 GJD3Q8N144 294 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 CCDC82Q8N4S0 544 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 CYP2W1Q8TAV3 490 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 CRYGNQ8WXF5 182 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 NEK1Q96PY6 1258 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 PLVAPQ9BX97 442 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 AGO4Q9HCK5 861 aaKnown RBP16.63■□□□□ 0.25
SPG7-205ENST00000561945 FAM217BQ9NTX9 383 aaPredicted RBP16.63■□□□□ 0.25
SPG7-205ENST00000561945 BRPF3Q9ULD4 1205 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 WDFY4Q6ZS81 3184 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 IGSF9BQ9UPX0 1349 aa16.63■□□□□ 0.25
SPG7-205ENST00000561945 SMIM35A0A1B0GVV1 85 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 POTEB3A0JP26 581 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 STXBP3O00186 592 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 MMP1P03956 469 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 LTBRP36941 435 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 SREBF1P36956 1147 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 POTEBQ6S5H4 581 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 SYNE3Q6ZMZ3 975 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 DHX32Q7L7V1 743 aaKnown RBP16.62■□□□□ 0.25
SPG7-205ENST00000561945 RAB11FIP4Q86YS3 637 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 NME8Q8N427 588 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 P2RX5Q93086 422 aa16.62■□□□□ 0.25
SPG7-205ENST00000561945 SDF4Q9BRK5 362 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms