RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 SRRM1Q8IYB3 904 aaKnown RBP11□□□□□ -0.65
GTF3C1-202ENST00000561623 SH2D3CQ8N5H7 860 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 ZBTB38Q8NAP3 1195 aaPredicted RBP11□□□□□ -0.65
GTF3C1-202ENST00000561623 GNGT2O14610 69 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 GRIN3BO60391 1043 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 ZBED4O75132 1171 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 INPP1P49441 399 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 CCZ1BP86790 482 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 CCZ1P86791 482 aaPredicted RBP11□□□□□ -0.65
GTF3C1-202ENST00000561623 CHRNDQ07001 517 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 RIOK1Q9BRS2 568 aaKnown RBP11□□□□□ -0.65
GTF3C1-202ENST00000561623 TRIM56Q9BRZ2 755 aaKnown RBP11□□□□□ -0.65
GTF3C1-202ENST00000561623 MED10Q9BTT4 135 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 CXorf56Q9H5V9 222 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 SAYSD1Q9NPB0 183 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 DISC1Q9NRI5 854 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 RASA4BC9J798 803 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 FOXN1O15353 648 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 RASA4O43374 803 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 KIF1CO43896 1103 aaKnown RBP11□□□□□ -0.65
GTF3C1-202ENST00000561623 TNNC2P02585 160 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 KITP10721 976 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 ART3Q13508 389 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 TMEM259Q4ZIN3 620 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 MFSD14BQ5SR56 506 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 E4F1Q66K89 784 aaPredicted RBP11□□□□□ -0.65
GTF3C1-202ENST00000561623 C1orf228Q6PIY5 440 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 RNF207Q6ZRF8 634 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 FBXO11Q86XK2 927 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 METTL13Q8N6R0 699 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 ARMC2Q8NEN0 867 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 COG1Q8WTW3 980 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 BAG5Q9UL15 447 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 PCDHA1Q9Y5I3 950 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 CYP2D7A0A087X1C5 515 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 ZNF185O15231 689 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 SASH1O94885 1247 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 POLR2MP0CAP2 368 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 HOXD10P28358 340 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 PMS2P54278 862 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 RGS9BPQ6ZS82 235 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 ETNK1Q9HBU6 452 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 DCTN4Q9UJW0 460 aa11□□□□□ -0.65
GTF3C1-202ENST00000561623 LGALS16A8MUM7 142 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 DNAJC8O75937 253 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 HSPA6P17066 643 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 EN1Q05925 392 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 DARS2Q6PI48 645 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 CLEC17AQ6ZS10 378 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 PIGSQ96S52 555 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 DRC3Q9H069 523 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 DDX47Q9H0S4 455 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 ENO4A6NNW6 628 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 CAPN9O14815 690 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 CHGBP05060 677 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 BTDP43251 543 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 STX1BP61266 288 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 GTF2IP78347 998 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 SPARCL1Q14515 664 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 GANCQ8TET4 914 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 RIN2Q8WYP3 895 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 KIF2CQ99661 725 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 HAUS8Q9BT25 410 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 KIAA0556O60303 1618 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 POLR2BP30876 1174 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 SLC12A1Q13621 1099 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 NCAPG2Q86XI2 1143 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 ZNF211Q13398 564 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 ELMSAN1Q6PJG2 1045 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 EPM2AIP1Q7L775 607 aaPredicted RBP10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 COA7Q96BR5 231 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 TMEM60Q9H2L4 133 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 DNAJC5Q9H3Z4 198 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 A6NJR5 290 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 PLEKHA8P1O95397 391 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 ARHGEF16Q5VV41 709 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 GLG1Q92896 1179 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 ANO9A1A5B4 782 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 LRRIQ4A6NIV6 560 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 CCDC188H7C350 402 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 MCF2LO15068 1137 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 DNAJC6O75061 913 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 PRCPP42785 496 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 ERFP50548 548 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 C1orf146Q5VVC0 180 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 SLC17A8Q8NDX2 589 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 PYROXD1Q8WU10 500 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 IL17RAQ96F46 866 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 FGD4Q96M96 766 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 TGS1Q96RS0 853 aaKnown RBP10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 POLIQ9UNA4 740 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 SYNMO15061 1565 aa10.99□□□□□ -0.65
GTF3C1-202ENST00000561623 PDE8BO95263 885 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 TMEM191BP0C7N4 346 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 ALAS1P13196 640 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 SLC16A2P36021 539 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 PDCD2Q16342 344 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 KCTD1Q719H9 257 aa10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 MARCH10Q8NA82 808 aaPredicted RBP10.98□□□□□ -0.65
GTF3C1-202ENST00000561623 TTLL11Q8NHH1 800 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms