RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 PCYT2Q99447 389 aa11.57□□□□□ -0.56
LRRC28-221ENST00000561276 MTG1Q9BT17 334 aaPredicted RBP11.57□□□□□ -0.56
LRRC28-221ENST00000561276 SENP6Q9GZR1 1112 aaPredicted RBP11.57□□□□□ -0.56
LRRC28-221ENST00000561276 SMARCAD1Q9H4L7 1026 aa11.57□□□□□ -0.56
LRRC28-221ENST00000561276 TUT1Q9H6E5 874 aaKnown RBP11.57□□□□□ -0.56
LRRC28-221ENST00000561276 PHF24Q9UPV7 400 aa11.57□□□□□ -0.56
LRRC28-221ENST00000561276 A0A1W2PQ45 241 aaPredicted RBP11.56□□□□□ -0.56
LRRC28-221ENST00000561276 A0A1W2PQY0 241 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 POTEMA6NI47 508 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 BACH1O14867 736 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 SPTLC2O15270 562 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 LGR5O75473 907 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 CABYRO75952 493 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 YEATS4O95619 227 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 ZNF286BP0CG31 522 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 VASPP50552 380 aaPredicted RBP11.56□□□□□ -0.56
LRRC28-221ENST00000561276 CHMP4BP1P59074 171 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 KRT85P78386 507 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 EPHA7Q15375 998 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 FAM160B1Q5W0V3 765 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 PLPPR4Q7Z2D5 763 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 IGSF22Q8N9C0 903 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 RDM1Q8NG50 284 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 DIS3LQ8TF46 1054 aaKnown RBP11.56□□□□□ -0.56
LRRC28-221ENST00000561276 KAT6AQ92794 2004 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 KAT2BQ92831 832 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 GLT1D1Q96MS3 346 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 RNPEPQ9H4A4 650 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 AZI2Q9H6S1 392 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 ZNF302Q9NR11 478 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 GABBR1Q9UBS5 961 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 LRWD1Q9UFC0 647 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 RCOR1Q9UKL0 485 aa11.56□□□□□ -0.56
LRRC28-221ENST00000561276 PPP6R2O75170 966 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 P4HBP07237 508 aaKnown RBP11.55□□□□□ -0.56
LRRC28-221ENST00000561276 COL6A1P12109 1028 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 NCLP19338 710 aaKnown RBP11.55□□□□□ -0.56
LRRC28-221ENST00000561276 CDC25AP30304 524 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 CLCN6P51797 869 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 PSMC6P62333 389 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 ITGA7Q13683 1181 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 KIAA0753Q2KHM9 967 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 NBPF20Q3BBV1 942 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 TRMT1LQ7Z2T5 733 aaKnown RBP11.55□□□□□ -0.56
LRRC28-221ENST00000561276 NECAB2Q7Z6G3 386 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 TRIM50Q86XT4 487 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 CCDC60Q8IWA6 550 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-221ENST00000561276 BANK1Q8NDB2 785 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 AFAP1L1Q8TED9 768 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 DYDC2Q96IM9 177 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 HSD17B14Q9BPX1 270 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 EIF2AK1Q9BQI3 630 aaKnown RBP11.55□□□□□ -0.56
LRRC28-221ENST00000561276 RAB34Q9BZG1 259 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 STARD7Q9NQZ5 370 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 ERAP1Q9NZ08 941 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 RGL1Q9NZL6 768 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 FBXO2Q9UK22 296 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-221ENST00000561276 SRPRBQ9Y5M8 271 aaKnown RBP11.55□□□□□ -0.56
LRRC28-221ENST00000561276 MAFBQ9Y5Q3 323 aaPredicted RBP11.55□□□□□ -0.56
LRRC28-221ENST00000561276 EMSYQ7Z589 1322 aa11.55□□□□□ -0.56
LRRC28-221ENST00000561276 PP2D1A8MPX8 630 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 HAS3O00219 553 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 SLITRK3O94933 977 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 F2P00734 622 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 ATP4AP20648 1035 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 MARK3P27448 753 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 LONP1P36776 959 aaKnown RBP11.54□□□□□ -0.56
LRRC28-221ENST00000561276 QARSP47897 775 aaKnown RBP11.54□□□□□ -0.56
LRRC28-221ENST00000561276 PSEN2P49810 448 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 CYP4A11Q02928 519 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 GRIN1Q05586 938 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 CTTNQ14247 550 aaKnown RBP11.54□□□□□ -0.56
LRRC28-221ENST00000561276 MFSD10Q14728 455 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 PDXDC2PQ6P474 469 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 SLC39A5Q6ZMH5 540 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 TPH2Q8IWU9 490 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 KRI1Q8N9T8 703 aaKnown RBP11.54□□□□□ -0.56
LRRC28-221ENST00000561276 PPP1R13LQ8WUF5 828 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 TNPO1Q92973 898 aaKnown RBP11.54□□□□□ -0.56
LRRC28-221ENST00000561276 SPATA32Q96LK8 384 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 CLIC6Q96NY7 704 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 KATNAL1Q9BW62 490 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 SCAND2PQ9GZW5 306 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-221ENST00000561276 C11orf49Q9H6J7 331 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 ZNF215Q9UL58 517 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-221ENST00000561276 MORC2Q9Y6X9 1032 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-221ENST00000561276 GRIN2DO15399 1336 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 TRIP12Q14669 1992 aaPredicted RBP11.54□□□□□ -0.56
LRRC28-221ENST00000561276 SCN10AQ9Y5Y9 1956 aa11.54□□□□□ -0.56
LRRC28-221ENST00000561276 BRCA2P51587 3418 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 POTEB3A0JP26 581 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 SPATA31C1P0DKV0 1188 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 RPA1P27694 616 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 ME1P48163 572 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 SLC26A2P50443 739 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 ATN1P54259 1190 aaPredicted RBP11.53□□□□□ -0.56
LRRC28-221ENST00000561276 PSMC5P62195 406 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 PLCB4Q15147 1175 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 UGCGQ16739 394 aa11.53□□□□□ -0.56
LRRC28-221ENST00000561276 SPECC1Q5M775 1068 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms